STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ureBUrease beta subunit; Amino acid transport and metabolism; Belongs to the urease beta subunit family. (104 aa)    
Predicted Functional Partners:
ureA
Urease gamma subunit; Amino acid transport and metabolism; Belongs to the urease gamma subunit family.
 0.999
ureC
Urease alpha subunit; Amino acid transport and metabolism; Belongs to the metallo-dependent hydrolases superfamily. Urease alpha subunit family.
 0.999
ureD
Urease accessory protein D; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter.
 
 
 0.953
ureE
Urease accessory protein E; Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly. Belongs to the UreE family.
 
  
 0.940
ureF
Urease accessory protein F; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter.
 
 
 0.934
ureG
Urease accessory protein G; Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG.
 
  
 0.929
CAK29363.1
Predicted permease.
       0.557
hypB
Hydrogenase nickel incorporation protein HypB.
  
  
 0.554
gltS-2
Ferredoxin-dependent glutamate synthase; Amino acid transport and metabolism.
      
 0.408
Your Current Organism:
Synechococcus sp. RCC307
NCBI taxonomy Id: 316278
Other names: S. sp. RCC307, Synechococcus sp. MINSyn016-15m-01 substr. AC6A1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.