STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAK29418.1Glycine/D-amino acid oxidases (deaminating); Amino acid transport and metabolism. (325 aa)    
Predicted Functional Partners:
CAK29279.1
Glycine/D-amino acid oxidase family enzyme; Amino acid transport and metabolism.
  
  
  0.971
thiG
Thiazole biosynthesis protein ThiG; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S.
 
 
 0.942
pstS-3
ABC-type phosphate transport system, substrate binding protein; Inorganic ion transport and metabolism; Belongs to the PstS family.
       0.773
gcvT
Glycine cleavage system T protein; The glycine cleavage system catalyzes the degradation of glycine.
  
 
 0.677
CAK29417.1
Uncharacterized conserved secreted protein.
       0.622
moeB
Molybdopterin biosynthesis protein; Coenzyme metabolism.
  
  
 0.504
gltS-2
Ferredoxin-dependent glutamate synthase; Amino acid transport and metabolism.
  
  
 0.504
CAK29416.1
Choline dehydrogenase; Amino acid transport and metabolism.
     
 0.446
purU
Formyltetrahydrofolate deformylase; Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4).
  
    0.422
CAK29414.1
Uncharacterized conserved membrane protein.
       0.400
Your Current Organism:
Synechococcus sp. RCC307
NCBI taxonomy Id: 316278
Other names: S. sp. RCC307, Synechococcus sp. MINSyn016-15m-01 substr. AC6A1
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