STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABB25135.1Serine/threonine protein kinase. (642 aa)    
Predicted Functional Partners:
ABB26223.1
Peptidoglycan glycosyltransferase.
   
 
 0.911
ABB25134.1
Conserved hypothetical protein.
  
  
 0.694
ABB25131.1
Conserved hypothetical protein.
 
     0.564
ABB25009.1
DEAD/DEAH box helicase-like.
  
    0.562
ABB25133.1
Conserved hypothetical protein.
       0.549
ABB26700.1
Conserved hypothetical protein.
  
     0.526
ABB25132.1
Conserved hypothetical protein.
       0.502
ABB26992.1
TPR repeat.
  
  
 0.492
ABB26105.1
Conserved hypothetical protein.
  
     0.488
ABB27053.1
Conserved hypothetical protein.
  
   
 0.488
Your Current Organism:
Synechococcus sp. CC9902
NCBI taxonomy Id: 316279
Other names: S. sp. CC9902
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