STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABB26532.1Penicillin-binding protein 1A. (692 aa)    
Predicted Functional Partners:
ABB26202.1
Putative carboxypeptidase.
     
 0.903
ABB26531.1
Chlorophyll synthase.
       0.803
ABB26530.1
Conserved hypothetical protein.
       0.784
ABB26612.1
Peptidoglycan glycosyltransferase.
  
 
 
 0.772
ABB26076.1
Conserved hypothetical protein.
   
 
 0.692
ABB25022.1
Peptidoglycan glycosyltransferase.
  
 
 
 0.689
ABB26729.1
Peptidase family M23/M37.
  
     0.655
murC
UDP-N-acetylmuramate--L-alanine ligase; Cell wall formation; Belongs to the MurCDEF family.
 
   
 0.651
ABB25442.1
Cell division protein FtsW; Belongs to the SEDS family.
  
 
 
 0.645
rodA
Cell division protein possibly involved in shape determination; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily.
  
 
 
 0.619
Your Current Organism:
Synechococcus sp. CC9902
NCBI taxonomy Id: 316279
Other names: S. sp. CC9902
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