Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABB26974.1 | ABB27208.1 | Syncc9902_2016 | Syncc9902_2250 | Glutamate synthase (ferredoxin). | Putative urea ABC transporter, urea binding protein. | 0.639 |
ABB26974.1 | hemE | Syncc9902_2016 | Syncc9902_0918 | Glutamate synthase (ferredoxin). | Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III. | 0.750 |
ABB26974.1 | ureA | Syncc9902_2016 | Syncc9902_2255 | Glutamate synthase (ferredoxin). | Urease, gamma subunit region; Belongs to the urease gamma subunit family. | 0.596 |
ABB26974.1 | ureB | Syncc9902_2016 | Syncc9902_2256 | Glutamate synthase (ferredoxin). | Urease, beta subunit; Belongs to the urease beta subunit family. | 0.414 |
ABB26974.1 | ureC | Syncc9902_2016 | Syncc9902_2257 | Glutamate synthase (ferredoxin). | Urease. Metallo peptidase. MEROPS family M38; Belongs to the metallo-dependent hydrolases superfamily. Urease alpha subunit family. | 0.612 |
ABB26974.1 | ureD | Syncc9902_2016 | Syncc9902_2254 | Glutamate synthase (ferredoxin). | Urease accessory protein D; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter. | 0.612 |
ABB26974.1 | ureE | Syncc9902_2016 | Syncc9902_2253 | Glutamate synthase (ferredoxin). | Urease accessory protein E; Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly. Belongs to the UreE family. | 0.681 |
ABB27204.1 | ABB27208.1 | Syncc9902_2246 | Syncc9902_2250 | ATPase. | Putative urea ABC transporter, urea binding protein. | 0.990 |
ABB27204.1 | ureA | Syncc9902_2246 | Syncc9902_2255 | ATPase. | Urease, gamma subunit region; Belongs to the urease gamma subunit family. | 0.424 |
ABB27204.1 | ureB | Syncc9902_2246 | Syncc9902_2256 | ATPase. | Urease, beta subunit; Belongs to the urease beta subunit family. | 0.461 |
ABB27204.1 | ureC | Syncc9902_2246 | Syncc9902_2257 | ATPase. | Urease. Metallo peptidase. MEROPS family M38; Belongs to the metallo-dependent hydrolases superfamily. Urease alpha subunit family. | 0.478 |
ABB27204.1 | ureD | Syncc9902_2246 | Syncc9902_2254 | ATPase. | Urease accessory protein D; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter. | 0.593 |
ABB27204.1 | ureE | Syncc9902_2246 | Syncc9902_2253 | ATPase. | Urease accessory protein E; Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly. Belongs to the UreE family. | 0.643 |
ABB27204.1 | ureF | Syncc9902_2246 | Syncc9902_2252 | ATPase. | Urease accessory protein F; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter. | 0.644 |
ABB27204.1 | ureG | Syncc9902_2246 | Syncc9902_2251 | ATPase. | Urease accessory protein UreG; Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG. | 0.551 |
ABB27208.1 | ABB26974.1 | Syncc9902_2250 | Syncc9902_2016 | Putative urea ABC transporter, urea binding protein. | Glutamate synthase (ferredoxin). | 0.639 |
ABB27208.1 | ABB27204.1 | Syncc9902_2250 | Syncc9902_2246 | Putative urea ABC transporter, urea binding protein. | ATPase. | 0.990 |
ABB27208.1 | ureA | Syncc9902_2250 | Syncc9902_2255 | Putative urea ABC transporter, urea binding protein. | Urease, gamma subunit region; Belongs to the urease gamma subunit family. | 0.478 |
ABB27208.1 | ureB | Syncc9902_2250 | Syncc9902_2256 | Putative urea ABC transporter, urea binding protein. | Urease, beta subunit; Belongs to the urease beta subunit family. | 0.499 |
ABB27208.1 | ureC | Syncc9902_2250 | Syncc9902_2257 | Putative urea ABC transporter, urea binding protein. | Urease. Metallo peptidase. MEROPS family M38; Belongs to the metallo-dependent hydrolases superfamily. Urease alpha subunit family. | 0.525 |
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