STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANZ17312.1RNA polymerase sigma-F factor; Belongs to the sigma-70 factor family. (279 aa)    
Predicted Functional Partners:
ANZ16989.1
AmfC protein.
  
 
 
 0.864
ANZ15919.1
GAF sensor hybrid histidine kinase.
  
  
 0.850
ANZ16354.1
Anti-sigma factor.
 
 
 0.839
ANZ15920.1
PAS/PAC sensor protein.
 
 
 0.805
rpoB
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
  
 
 0.780
rpoC
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
  
 
 0.763
ANZ17311.1
RNA polymerase sigma-F factor; Belongs to the sigma-70 factor family.
 
   
0.759
ANZ17313.1
Hypothetical protein.
       0.745
ANZ20287.1
PAS/PAC sensor protein.
 
 
 0.741
ANZ19580.1
PAS/PAC sensor protein.
 
 
 0.737
Your Current Organism:
Streptomyces noursei
NCBI taxonomy Id: 316284
Other names: S. noursei ATCC 11455, Streptomyces noursei ATCC 11455, Streptomyces noursei str. ATCC 11455, Streptomyces noursei strain ATCC 11455
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.