Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ETK37321.1 | mlbC | MPTA5024_04495 | MPTA5024_21455 | Multidrug transporter. | Lantibiotic cyclase. | 0.613 |
ETK37321.1 | mlbZ | MPTA5024_04495 | MPTA5024_21415 | Multidrug transporter. | ABC transporter ATP binding domain. | 0.613 |
ETK37561.1 | mlbZ | MPTA5024_03125 | MPTA5024_21415 | Transporter. | ABC transporter ATP binding domain. | 0.517 |
mlbC | ETK37321.1 | MPTA5024_21455 | MPTA5024_04495 | Lantibiotic cyclase. | Multidrug transporter. | 0.613 |
mlbC | mlbE | MPTA5024_21455 | MPTA5024_21485 | Lantibiotic cyclase. | ABC transporter permease component. | 0.514 |
mlbC | mlbZ | MPTA5024_21455 | MPTA5024_21415 | Lantibiotic cyclase. | ABC transporter ATP binding domain. | 0.613 |
mlbC | obgE | MPTA5024_21455 | MPTA5024_31840 | Lantibiotic cyclase. | GTPase CgtA; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. | 0.613 |
mlbC | pnp | MPTA5024_21455 | MPTA5024_12495 | Lantibiotic cyclase. | Polynucleotide phosphorylase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | 0.613 |
mlbE | mlbC | MPTA5024_21485 | MPTA5024_21455 | ABC transporter permease component. | Lantibiotic cyclase. | 0.514 |
mlbE | mlbZ | MPTA5024_21485 | MPTA5024_21415 | ABC transporter permease component. | ABC transporter ATP binding domain. | 0.555 |
mlbJ | mlbO | MPTA5024_21405 | MPTA5024_21420 | Conserved protein with unknown function. | Cytochrome P450. | 0.773 |
mlbJ | mlbQ | MPTA5024_21405 | MPTA5024_21425 | Conserved protein with unknown function. | Putative lipoprotein. | 0.918 |
mlbJ | mlbY | MPTA5024_21405 | MPTA5024_21410 | Conserved protein with unknown function. | ABC transporter permease component. | 0.817 |
mlbJ | mlbZ | MPTA5024_21405 | MPTA5024_21415 | Conserved protein with unknown function. | ABC transporter ATP binding domain. | 0.773 |
mlbO | mlbJ | MPTA5024_21420 | MPTA5024_21405 | Cytochrome P450. | Conserved protein with unknown function. | 0.773 |
mlbO | mlbQ | MPTA5024_21420 | MPTA5024_21425 | Cytochrome P450. | Putative lipoprotein. | 0.773 |
mlbO | mlbY | MPTA5024_21420 | MPTA5024_21410 | Cytochrome P450. | ABC transporter permease component. | 0.773 |
mlbO | mlbZ | MPTA5024_21420 | MPTA5024_21415 | Cytochrome P450. | ABC transporter ATP binding domain. | 0.792 |
mlbQ | mlbJ | MPTA5024_21425 | MPTA5024_21405 | Putative lipoprotein. | Conserved protein with unknown function. | 0.918 |
mlbQ | mlbO | MPTA5024_21425 | MPTA5024_21420 | Putative lipoprotein. | Cytochrome P450. | 0.773 |
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