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yqcC protein (Escherichia coli K12 DH10B) - STRING interaction network
"yqcC" - Hypothetical protein in Escherichia coli K12 DH10B
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
yqcCHypothetical protein (109 aa)    
Predicted Functional Partners:
truC
tRNA pseudouridine synthase C; Responsible for synthesis of pseudouridine from uracil- 65 in transfer RNAs (260 aa)
   
        0.864
yqcA
Flavodoxin; Probable electron transporter (149 aa)
              0.805
yqiB
Hypothetical protein (140 aa)
   
          0.557
rsd
anti-RNA polymerase sigma 70 factor; Binds RpoD and negatively regulates RpoD-mediated transcription activation by preventing the interaction between the primary sigma factor RpoD with the catalytic core of the RNA polymerase and with promoter DNA. May be involved in replacement of the RNA polymerase sigma subunit from RpoD to RpoS during the transition from exponential growth to the stationary phase (158 aa)
   
          0.539
rmf
Ribosome modulation factor; During stationary phase, converts 70S ribosomes to an inactive dimeric form (100S ribosomes). May form immature 90S particles, which are converted to mature 100S ribosomes by the hibernation promoting factor Hpf. Inactivates ribosomes by covering the peptidyl transferase (PTase) center of the 23S rRNA and the entrance of peptide exit tunnel. Also involved in protection against heat stress, but this role is not dependent on the maintenance of ribosome dimers (55 aa)
   
          0.536
dsbG
Disulfide isomerase/thiol-disulfide oxidase; Involved in disulfide bond formation. DsbG and DsbC are part of a periplasmic reducing system that controls the level of cysteine sulfenylation, and provides reducing equivalents to rescue oxidatively damaged secreted proteins such as ErfK, YbiS and YnhG. Probably also functions as a disulfide isomerase with a narrower substrate specificity than DsbC. DsbG is maintained in a reduced state by DsbD. Displays chaperone activity in both redox states in vitro (248 aa)
   
          0.462
ECDH10B_0565
Disulfide isomerase/thiol-disulfide oxidase (248 aa)
   
          0.462
yifE
Hypothetical protein (112 aa)
   
          0.433
yejK
Nucleoid-associated protein NdpA (335 aa)
   
          0.425
yihI
Hypothetical protein; A GTPase-activating protein (GAP) that modifies Der/EngA GTPase function, negatively regulating cell growth, probably via ribosome assembly. Stimulates the GTPase activity of Der; a construct missing the first 45 residues is even more stimulatory. Does not stimulate 2 other GTPases (ObgE and Era). Overexpression inhibits cell growth; precursor 16S rRNA accumulates, the 23S rRNA is 6-7 bases longer than usual, and 50S ribosomal subunits are improperly assembled, leading to 45S subunits lacking proteins L9, L18 and L25. Overexpression of Der in the same cells suppre [...] (169 aa)
   
     
  0.421
Your Current Organism:
Escherichia coli K12 DH10B
NCBI taxonomy Id: 316385
Other names: E. coli str. K-12 substr. DH10B, Escherichia coli DH10B, Escherichia coli K12 DH10B, Escherichia coli str. K-12 substr. DH10B, Escherichia coli str. K12 substr. DH10B, Escherichia coli strain K12 substrain DH10B
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