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lptF protein (Escherichia coli K12 DH10B) - STRING interaction network
"lptF" - Inner membrane protein in Escherichia coli K12 DH10B
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lptFInner membrane protein; Part of the ABC transporter complex LptBFG involved in the translocation of lipopolysaccharide (LPS) from the inner membrane to the outer membrane (366 aa)    
Predicted Functional Partners:
lptG
Inner membrane protein; Part of the ABC transporter complex LptBFG involved in the translocation of lipopolysaccharide (LPS) from the inner membrane to the outer membrane (360 aa)
 
 
  0.999
lptB
Putative ABC transporter ATP-binding protein YhbG; Part of the ABC transporter complex LptBFG involved in the translocation of lipopolysaccharide (LPS) from the inner membrane to the outer membrane. Probably responsible for energy coupling to the transport system (241 aa)
 
  0.996
btuD
Vitamin B12-transporter ATPase; Part of the ABC transporter complex BtuCDF involved in vitamin B12 import. Responsible for energy coupling to the transport system (249 aa)
         
  0.908
ugpA
Glycerol-3-phosphate transporter permease; Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane (295 aa)
       
    0.907
malK
Maltose/maltodextrin transporter ATP-binding protein; Part of the ABC transporter complex MalEFGK involved in maltose/maltodextrin import. Responsible for energy coupling to the transport system (371 aa)
       
    0.907
malF
Maltose transporter membrane protein; Part of the binding-protein-dependent transport system for maltose; probably responsible for the translocation of the substrate across the membrane (514 aa)
       
    0.907
ugpC
Glycerol-3-phosphate transporter ATP-binding subunit; Part of the ABC transporter complex UgpABCE involved in sn-glycerol-3-phosphate import. Responsible for energy coupling to the transport system (Probable). Can also transport glycerophosphoryl diesters (356 aa)
       
    0.907
fepC
Iron-enterobactin transporter ATP-binding protein; Part of the binding-protein-dependent transport system for ferric enterobactin. Probably responsible for energy coupling to the transport system (271 aa)
       
    0.907
btuC
Vtamin B12-transporter permease; Part of the ABC transporter complex BtuCDF involved in vitamin B12 import. Involved in the translocation of the substrate across the membrane (326 aa)
         
  0.904
ccmB
Heme ABC transporter membrane protein; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes (220 aa)
     
 
  0.903
Your Current Organism:
Escherichia coli K12 DH10B
NCBI taxonomy Id: 316385
Other names: E. coli str. K-12 substr. DH10B, Escherichia coli DH10B, Escherichia coli K12 DH10B, Escherichia coli str. K-12 substr. DH10B, Escherichia coli str. K12 substr. DH10B, Escherichia coli strain K12 substrain DH10B
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