STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tcr_1153ATP-binding cassette (ABC) superfamily nitrate transporter, substrate-binding component; TIGRFAM: Twin-arginine translocation pathway signal; KEGG: vvy:VVA0951 nitrate transporter system, periplasmic component. (461 aa)    
Predicted Functional Partners:
Tcr_1155
ATP-binding cassette (ABC) superfamily nitrate transporter, ATP-binding component; KEGG: vvy:VVA0949 nitrate transporter system, ATPase component; TIGRFAM: nitrate ABC transporter, ATPase subunits C and D; PFAM: ABC transporter related; SMART: ATPase.
 
 0.998
Tcr_1154
ATP-binding cassette (ABC) superfamily nitrate transporter, permease component; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vvy:VVA0950 nitrate transporter system, permease component.
 
 
 0.995
Tcr_1159
Assimilatory nitrate reductase (NADH) alpha subunit apoprotein; PFAM: molybdopterin oxidoreductase molydopterin dinucleotide-binding region molybdopterin oxidoreductase Fe4S4 region BFD-like [2Fe-2S]-binding region; KEGG: nasA, RSp1219; probable nitrate reductase large subunit oxidoreductase protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
 
 
 0.988
Tcr_1156
Assimilatory nitrate reductase (NADH) beta subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: mca:MCA0592 nitrite reductase [NAD(P)H], large subunit.
 
  
 0.813
Tcr_1788
ATP-binding cassette (ABC) superfamily transporter, ATP-binding component; PFAM: ABC transporter related; SMART: ATPase; KEGG: mja:MJ0412 putative taurine transport system ATP-binding protein.
  
 0.774
Tcr_0032
ATP-binding cassette (ABC) superfamily transporter, ATPase component; PFAM: ABC transporter related; SMART: ATPase; KEGG: btk:BT9727_2665 alkanesulfonates transport ATP-binding protein.
  
 0.755
Tcr_1151
PFAM: response regulator receiver ANTAR; KEGG: mca:MCA0588 response regulator NasT.
 
  
 0.723
Tcr_0034
ATP-binding cassette (ABC) superfamily transporter, permease component; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pae:PA2327 putative nitrate transport system permease protein.
 
  
 0.673
cysG
uroporphyrinogen-III C-methyltransferase; Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD-dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme.
  
  
 0.629
Tcr_0769
PFAM: response regulator receiver ANTAR; KEGG: mca:MCA0588 response regulator NasT.
 
  
 0.618
Your Current Organism:
Hydrogenovibrio crunogenus
NCBI taxonomy Id: 317025
Other names: H. crunogenus XCL-2, Hydrogenovibrio crunogenus XCL-2, Thiomicrospira crunogena XCL-2
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