STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tcr_1801Drug/metabolite (DMT) superfamily transporter; PFAM: protein of unknown function DUF6, transmembrane; KEGG: wsu:WS1117 probable transmembrane protein. (284 aa)    
Predicted Functional Partners:
Tcr_1804
PFAM: fatty acid desaturase; KEGG: bcl:ABC3939 hypothetical protein.
 
     0.803
Tcr_1802
KEGG: aci:ACIAD1295 hypothetical protein.
 
     0.770
Tcr_1803
Beta-lactamase family protein; PFAM: beta-lactamase-like; KEGG: bca:BCE3466 metallo-beta-lactamase family protein.
 
    0.731
Tcr_2159
PFAM: phosphate-selective porin O and P.
  
     0.702
Tcr_0771
Hypothetical protein; KEGG: cjr:CJE1262 general glycosylation pathway protein.
  
     0.513
Tcr_0831
KEGG: bbr:BB3827 hypothetical protein.
  
     0.503
Tcr_1914
Hypothetical protein.
  
     0.491
Tcr_1604
PFAM: protein of unknown function DUF6, transmembrane; KEGG: oih:OB0608 hypothetical protein.
  
     0.482
Tcr_0046
Hypothetical protein, predicted periplasmic/secreted protein.
  
     0.465
Tcr_1800
PFAM: NLPA lipoprotein; KEGG: syw:SYNW1415 ABC transporter, nitrate-like substrate binding protein.
       0.462
Your Current Organism:
Hydrogenovibrio crunogenus
NCBI taxonomy Id: 317025
Other names: H. crunogenus XCL-2, Hydrogenovibrio crunogenus XCL-2, Thiomicrospira crunogena XCL-2
Server load: low (24%) [HD]