node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Sfri_0022 | Sfri_0452 | Sfri_0022 | Sfri_0452 | Sun protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | PFAM: UvrD/REP helicase; DNA topoisomerase, type IA, zn finger domain protein; KEGG: cps:CPS_2454 helicase IV. | 0.696 |
Sfri_0022 | Sfri_3397 | Sfri_0022 | Sfri_3397 | Sun protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | TIGRFAM: DNA helicase II; PFAM: UvrD/REP helicase; KEGG: son:SO0467 DNA helicase II. | 0.493 |
Sfri_0022 | ligA | Sfri_0022 | Sfri_2461 | Sun protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | DNA ligase, NAD-dependent; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA. | 0.845 |
Sfri_0022 | polA | Sfri_0022 | Sfri_3943 | Sun protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.495 |
Sfri_0022 | rep | Sfri_0022 | Sfri_0428 | Sun protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | ATP-dependent DNA helicase Rep; Rep helicase is a single-stranded DNA-dependent ATPase involved in DNA replication; it can initiate unwinding at a nick in the DNA. It binds to the single-stranded DNA and acts in a progressive fashion along the DNA in the 3' to 5' direction. | 0.493 |
Sfri_0022 | topA | Sfri_0022 | Sfri_2478 | Sun protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.541 |
Sfri_0452 | Sfri_0022 | Sfri_0452 | Sfri_0022 | PFAM: UvrD/REP helicase; DNA topoisomerase, type IA, zn finger domain protein; KEGG: cps:CPS_2454 helicase IV. | Sun protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | 0.696 |
Sfri_0452 | leuS | Sfri_0452 | Sfri_0705 | PFAM: UvrD/REP helicase; DNA topoisomerase, type IA, zn finger domain protein; KEGG: cps:CPS_2454 helicase IV. | TIGRFAM: leucyl-tRNA synthetase; KEGG: son:SO1174 leucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.543 |
Sfri_0452 | ligA | Sfri_0452 | Sfri_2461 | PFAM: UvrD/REP helicase; DNA topoisomerase, type IA, zn finger domain protein; KEGG: cps:CPS_2454 helicase IV. | DNA ligase, NAD-dependent; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA. | 0.798 |
Sfri_0452 | polA | Sfri_0452 | Sfri_3943 | PFAM: UvrD/REP helicase; DNA topoisomerase, type IA, zn finger domain protein; KEGG: cps:CPS_2454 helicase IV. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.744 |
Sfri_0452 | topA | Sfri_0452 | Sfri_2478 | PFAM: UvrD/REP helicase; DNA topoisomerase, type IA, zn finger domain protein; KEGG: cps:CPS_2454 helicase IV. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.894 |
Sfri_1484 | ligA | Sfri_1484 | Sfri_2461 | PFAM: ATP dependent DNA ligase; KEGG: son:SO2204 DNA ligase, ATP-dependent. | DNA ligase, NAD-dependent; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA. | 0.935 |
Sfri_1484 | polA | Sfri_1484 | Sfri_3943 | PFAM: ATP dependent DNA ligase; KEGG: son:SO2204 DNA ligase, ATP-dependent. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.963 |
Sfri_2460 | ligA | Sfri_2460 | Sfri_2461 | KEGG: son:SO2863 hypothetical protein. | DNA ligase, NAD-dependent; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA. | 0.659 |
Sfri_2460 | smc | Sfri_2460 | Sfri_2463 | KEGG: son:SO2863 hypothetical protein. | Chromosome segregation protein SMC; Required for chromosome condensation and partitioning. Belongs to the SMC family. | 0.435 |
Sfri_3397 | Sfri_0022 | Sfri_3397 | Sfri_0022 | TIGRFAM: DNA helicase II; PFAM: UvrD/REP helicase; KEGG: son:SO0467 DNA helicase II. | Sun protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | 0.493 |
Sfri_3397 | ligA | Sfri_3397 | Sfri_2461 | TIGRFAM: DNA helicase II; PFAM: UvrD/REP helicase; KEGG: son:SO0467 DNA helicase II. | DNA ligase, NAD-dependent; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA. | 0.673 |
Sfri_3397 | polA | Sfri_3397 | Sfri_3943 | TIGRFAM: DNA helicase II; PFAM: UvrD/REP helicase; KEGG: son:SO0467 DNA helicase II. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.598 |
Sfri_3397 | topA | Sfri_3397 | Sfri_2478 | TIGRFAM: DNA helicase II; PFAM: UvrD/REP helicase; KEGG: son:SO0467 DNA helicase II. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.588 |
leuS | Sfri_0452 | Sfri_0705 | Sfri_0452 | TIGRFAM: leucyl-tRNA synthetase; KEGG: son:SO1174 leucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | PFAM: UvrD/REP helicase; DNA topoisomerase, type IA, zn finger domain protein; KEGG: cps:CPS_2454 helicase IV. | 0.543 |