node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Pden_0537 | Pden_0539 | Pden_0537 | Pden_0539 | PFAM: Peptidoglycan-binding domain 1 protein; KEGG: rsp:RSP_1855 hypothetical protein. | Signal transduction histidine kinase regulating citrate/malate metabolism; KEGG: sit:TM1040_2311 conserved hypothetical protein. | 0.861 |
Pden_0537 | Pden_0541 | Pden_0537 | Pden_0541 | PFAM: Peptidoglycan-binding domain 1 protein; KEGG: rsp:RSP_1855 hypothetical protein. | Pyruvate phosphate dikinase; PFAM: PEP-utilizing enzyme; PEP-utilising enzyme, mobile region; KEGG: rsp:RSP_1859 pyruvate phosphate dikinase. | 0.438 |
Pden_0537 | glyQ | Pden_0537 | Pden_0538 | PFAM: Peptidoglycan-binding domain 1 protein; KEGG: rsp:RSP_1855 hypothetical protein. | PFAM: glycyl-tRNA synthetase, alpha subunit; KEGG: rsp:RSP_1856 glycyl-tRNA synthetase alpha subunit. | 0.658 |
Pden_0537 | glyS | Pden_0537 | Pden_0540 | PFAM: Peptidoglycan-binding domain 1 protein; KEGG: rsp:RSP_1855 hypothetical protein. | KEGG: rsp:RSP_1858 glycyl-tRNA synthetase beta subunit. | 0.654 |
Pden_0539 | Pden_0537 | Pden_0539 | Pden_0537 | Signal transduction histidine kinase regulating citrate/malate metabolism; KEGG: sit:TM1040_2311 conserved hypothetical protein. | PFAM: Peptidoglycan-binding domain 1 protein; KEGG: rsp:RSP_1855 hypothetical protein. | 0.861 |
Pden_0539 | Pden_0541 | Pden_0539 | Pden_0541 | Signal transduction histidine kinase regulating citrate/malate metabolism; KEGG: sit:TM1040_2311 conserved hypothetical protein. | Pyruvate phosphate dikinase; PFAM: PEP-utilizing enzyme; PEP-utilising enzyme, mobile region; KEGG: rsp:RSP_1859 pyruvate phosphate dikinase. | 0.741 |
Pden_0539 | glyQ | Pden_0539 | Pden_0538 | Signal transduction histidine kinase regulating citrate/malate metabolism; KEGG: sit:TM1040_2311 conserved hypothetical protein. | PFAM: glycyl-tRNA synthetase, alpha subunit; KEGG: rsp:RSP_1856 glycyl-tRNA synthetase alpha subunit. | 0.991 |
Pden_0539 | glyS | Pden_0539 | Pden_0540 | Signal transduction histidine kinase regulating citrate/malate metabolism; KEGG: sit:TM1040_2311 conserved hypothetical protein. | KEGG: rsp:RSP_1858 glycyl-tRNA synthetase beta subunit. | 0.937 |
Pden_0539 | ileS | Pden_0539 | Pden_3612 | Signal transduction histidine kinase regulating citrate/malate metabolism; KEGG: sit:TM1040_2311 conserved hypothetical protein. | Isoleucyl-tRNA synthetase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile). Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 1 subfamily. | 0.665 |
Pden_0539 | leuS | Pden_0539 | Pden_2765 | Signal transduction histidine kinase regulating citrate/malate metabolism; KEGG: sit:TM1040_2311 conserved hypothetical protein. | TIGRFAM: leucyl-tRNA synthetase; KEGG: rsp:RSP_0840 leucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.677 |
Pden_0539 | proS | Pden_0539 | Pden_1299 | Signal transduction histidine kinase regulating citrate/malate metabolism; KEGG: sit:TM1040_2311 conserved hypothetical protein. | prolyl-tRNA synthetase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro); Belongs to the class-II aminoacyl-tRNA synthetase family. ProS type 2 subfamily. | 0.601 |
Pden_0539 | trmD | Pden_0539 | Pden_3883 | Signal transduction histidine kinase regulating citrate/malate metabolism; KEGG: sit:TM1040_2311 conserved hypothetical protein. | tRNA (Guanine37-N(1)-) methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family. | 0.404 |
Pden_0539 | valS | Pden_0539 | Pden_2331 | Signal transduction histidine kinase regulating citrate/malate metabolism; KEGG: sit:TM1040_2311 conserved hypothetical protein. | valyl-tRNA synthetase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily. | 0.664 |
Pden_0541 | Pden_0537 | Pden_0541 | Pden_0537 | Pyruvate phosphate dikinase; PFAM: PEP-utilizing enzyme; PEP-utilising enzyme, mobile region; KEGG: rsp:RSP_1859 pyruvate phosphate dikinase. | PFAM: Peptidoglycan-binding domain 1 protein; KEGG: rsp:RSP_1855 hypothetical protein. | 0.438 |
Pden_0541 | Pden_0539 | Pden_0541 | Pden_0539 | Pyruvate phosphate dikinase; PFAM: PEP-utilizing enzyme; PEP-utilising enzyme, mobile region; KEGG: rsp:RSP_1859 pyruvate phosphate dikinase. | Signal transduction histidine kinase regulating citrate/malate metabolism; KEGG: sit:TM1040_2311 conserved hypothetical protein. | 0.741 |
Pden_0541 | glyQ | Pden_0541 | Pden_0538 | Pyruvate phosphate dikinase; PFAM: PEP-utilizing enzyme; PEP-utilising enzyme, mobile region; KEGG: rsp:RSP_1859 pyruvate phosphate dikinase. | PFAM: glycyl-tRNA synthetase, alpha subunit; KEGG: rsp:RSP_1856 glycyl-tRNA synthetase alpha subunit. | 0.719 |
Pden_0541 | glyS | Pden_0541 | Pden_0540 | Pyruvate phosphate dikinase; PFAM: PEP-utilizing enzyme; PEP-utilising enzyme, mobile region; KEGG: rsp:RSP_1859 pyruvate phosphate dikinase. | KEGG: rsp:RSP_1858 glycyl-tRNA synthetase beta subunit. | 0.742 |
glmU | glyQ | Pden_0618 | Pden_0538 | UDP-N-acetylglucosamine pyrophosphorylase; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain. In the C-terminal section; belongs to the transferase hexapeptide repeat family. | PFAM: glycyl-tRNA synthetase, alpha subunit; KEGG: rsp:RSP_1856 glycyl-tRNA synthetase alpha subunit. | 0.697 |
glmU | glyS | Pden_0618 | Pden_0540 | UDP-N-acetylglucosamine pyrophosphorylase; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain. In the C-terminal section; belongs to the transferase hexapeptide repeat family. | KEGG: rsp:RSP_1858 glycyl-tRNA synthetase beta subunit. | 0.648 |
glmU | proS | Pden_0618 | Pden_1299 | UDP-N-acetylglucosamine pyrophosphorylase; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain. In the C-terminal section; belongs to the transferase hexapeptide repeat family. | prolyl-tRNA synthetase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro); Belongs to the class-II aminoacyl-tRNA synthetase family. ProS type 2 subfamily. | 0.403 |