node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Pden_1997 | Pden_2000 | Pden_1997 | Pden_2000 | Putative uroporphyrinogen-III synthase; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III. | PFAM: YCII-related; KEGG: rsp:RSP_1511 hypothetical protein. | 0.742 |
Pden_1997 | Pden_2001 | Pden_1997 | Pden_2001 | Putative uroporphyrinogen-III synthase; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III. | PFAM: protein of unknown function DUF55; KEGG: rsp:RSP_1512 hypothetical protein. | 0.742 |
Pden_1997 | gpsA | Pden_1997 | Pden_1999 | Putative uroporphyrinogen-III synthase; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III. | PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: sil:SPO3855 glycerol-3-phosphate dehydrogenase (NAD(P)+); Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family. | 0.742 |
Pden_1997 | tsaD | Pden_1997 | Pden_1998 | Putative uroporphyrinogen-III synthase; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III. | O-sialoglycoprotein endopeptidase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family. | 0.792 |
Pden_2000 | Pden_1997 | Pden_2000 | Pden_1997 | PFAM: YCII-related; KEGG: rsp:RSP_1511 hypothetical protein. | Putative uroporphyrinogen-III synthase; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III. | 0.742 |
Pden_2000 | Pden_2001 | Pden_2000 | Pden_2001 | PFAM: YCII-related; KEGG: rsp:RSP_1511 hypothetical protein. | PFAM: protein of unknown function DUF55; KEGG: rsp:RSP_1512 hypothetical protein. | 0.885 |
Pden_2000 | gpsA | Pden_2000 | Pden_1999 | PFAM: YCII-related; KEGG: rsp:RSP_1511 hypothetical protein. | PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: sil:SPO3855 glycerol-3-phosphate dehydrogenase (NAD(P)+); Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family. | 0.868 |
Pden_2000 | tsaD | Pden_2000 | Pden_1998 | PFAM: YCII-related; KEGG: rsp:RSP_1511 hypothetical protein. | O-sialoglycoprotein endopeptidase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family. | 0.871 |
Pden_2001 | Pden_1997 | Pden_2001 | Pden_1997 | PFAM: protein of unknown function DUF55; KEGG: rsp:RSP_1512 hypothetical protein. | Putative uroporphyrinogen-III synthase; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III. | 0.742 |
Pden_2001 | Pden_2000 | Pden_2001 | Pden_2000 | PFAM: protein of unknown function DUF55; KEGG: rsp:RSP_1512 hypothetical protein. | PFAM: YCII-related; KEGG: rsp:RSP_1511 hypothetical protein. | 0.885 |
Pden_2001 | gpsA | Pden_2001 | Pden_1999 | PFAM: protein of unknown function DUF55; KEGG: rsp:RSP_1512 hypothetical protein. | PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: sil:SPO3855 glycerol-3-phosphate dehydrogenase (NAD(P)+); Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family. | 0.868 |
Pden_2001 | tsaD | Pden_2001 | Pden_1998 | PFAM: protein of unknown function DUF55; KEGG: rsp:RSP_1512 hypothetical protein. | O-sialoglycoprotein endopeptidase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family. | 0.882 |
Pden_2015 | Pden_4393 | Pden_2015 | Pden_4393 | PFAM: phospholipid/glycerol acyltransferase; KEGG: rde:RD1_1601 acyltransferase, putative. | PFAM: FAD dependent oxidoreductase; KEGG: rsp:RSP_2670 putative FAD-dependent glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family. | 0.819 |
Pden_2015 | gpsA | Pden_2015 | Pden_1999 | PFAM: phospholipid/glycerol acyltransferase; KEGG: rde:RD1_1601 acyltransferase, putative. | PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: sil:SPO3855 glycerol-3-phosphate dehydrogenase (NAD(P)+); Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family. | 0.856 |
Pden_2015 | plsY | Pden_2015 | Pden_2553 | PFAM: phospholipid/glycerol acyltransferase; KEGG: rde:RD1_1601 acyltransferase, putative. | Acyl-phosphate glycerol-3-phosphate acyltransferase; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP. | 0.944 |
Pden_4393 | Pden_2015 | Pden_4393 | Pden_2015 | PFAM: FAD dependent oxidoreductase; KEGG: rsp:RSP_2670 putative FAD-dependent glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family. | PFAM: phospholipid/glycerol acyltransferase; KEGG: rde:RD1_1601 acyltransferase, putative. | 0.819 |
Pden_4393 | gpsA | Pden_4393 | Pden_1999 | PFAM: FAD dependent oxidoreductase; KEGG: rsp:RSP_2670 putative FAD-dependent glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family. | PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: sil:SPO3855 glycerol-3-phosphate dehydrogenase (NAD(P)+); Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family. | 0.925 |
Pden_4393 | plsY | Pden_4393 | Pden_2553 | PFAM: FAD dependent oxidoreductase; KEGG: rsp:RSP_2670 putative FAD-dependent glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family. | Acyl-phosphate glycerol-3-phosphate acyltransferase; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP. | 0.913 |
der | gpsA | Pden_2427 | Pden_1999 | Small GTP-binding protein; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family. | PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: sil:SPO3855 glycerol-3-phosphate dehydrogenase (NAD(P)+); Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family. | 0.950 |
gpsA | Pden_1997 | Pden_1999 | Pden_1997 | PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: sil:SPO3855 glycerol-3-phosphate dehydrogenase (NAD(P)+); Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family. | Putative uroporphyrinogen-III synthase; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III. | 0.742 |