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ABP73738.1 protein (Shewanella putrefaciens) - STRING interaction network
"ABP73738.1" - Beta sliding clamp in Shewanella putrefaciens
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Predicted Interactions
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textmining
co-expression
protein homology
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ABP73738.1Beta sliding clamp; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3’-5’ exonuclease proofreading activity. The beta chain is required for initiation of replication as [...] (366 aa)    
Predicted Functional Partners:
ABP76584.1
KEGG- son-SO1172 DNA polymerase III delta subunit; TIGRFAM- DNA polymerase III, delta subunit; PFAM- DNA polymerase III, delta (343 aa)
 
  0.993
ABP76023.1
KEGG- son-SO2013 DNA polymerase III, gamma and tau subunits; TIGRFAM- DNA polymerase III, subunits gamma and tau; PFAM- AAA ATPase, central domain protein; SMART- AAA ATPase (957 aa)
 
  0.993
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5’-3’ exonuclease activity (922 aa)
 
  0.992
ABP75091.1
KEGG- shm-Shewmr7_2693 DNA polymerase III, alpha subunit; TIGRFAM- DNA polymerase III, alpha subunit; PFAM- PHP C-terminal domain protein; nucleic acid binding, OB-fold, tRNA/helicase-type; SMART- phosphoesterase PHP domain protein (1157 aa)
   
  0.992
dnaQ
DNA polymerase III subunit epsilon; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3’-5’ exonuclease (242 aa)
 
 
  0.990
dnaA
Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box)- 5’-TTATC[CA]A[CA]A-3’. DnaA binds to ATP and to acidic phospholipids (461 aa)
 
 
  0.990
ABP75934.1
TIGRFAM- DNA polymerase III, delta prime subunit; KEGG- she-Shewmr4_1662 DNA polymerase III, delta prime subunit (318 aa)
 
  0.988
ABP75416.1
Regulatory inactivation of DnaA Hda protein; PFAM- Chromosomal replication initiator, DnaA; KEGG- shm-Shewmr7_1651 chromosomal replication initiator, DnaA; Belongs to the DnaA family (236 aa)
 
 
  0.969
dinB
DNA polymerase IV; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3’-5’ exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII (379 aa)
     
 
  0.957
gyrB
DNA gyrase subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner (805 aa)
 
  0.941
Your Current Organism:
Shewanella putrefaciens
NCBI taxonomy Id: 319224
Other names: S. putrefaciens CN-32, Shewanella putrefaciens, Shewanella putrefaciens CN-32, Shewanella putrefaciens str. CN-32, Shewanella putrefaciens strain CN-32
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