STRINGSTRING
ABP73741.1 protein (Shewanella putrefaciens) - STRING interaction network
"ABP73741.1" - PFAM: HDOD in Shewanella putrefaciens
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Cooccurence
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[Homology]
Score
ABP73741.1PFAM- HDOD; KEGG- shm-Shewmr7_0007 putative signal transduction protein (348 aa)    
Predicted Functional Partners:
ABP76854.1
Histidine kinase; KEGG- shm-Shewmr7_3307 multi-sensor hybrid histidine kinase; TIGRFAM- PAS sensor protein; PFAM- response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; Hpt domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART- PAS domain containing protein; PAC repeat-containing protein (1771 aa)
 
 
 
  0.729
ABP76520.1
PFAM- HDOD; KEGG- shm-Shewmr7_1137 putative signal transduction protein (280 aa)
   
          0.587
ABP76163.1
KEGG- shm-Shewmr7_1490 hypothetical protein (1097 aa)
   
          0.493
ABP74167.1
KEGG- she-Shewmr4_0339 hypothetical protein (254 aa)
   
          0.470
ABP74366.1
KEGG- she-Shewmr4_3425 hypothetical protein (123 aa)
   
          0.467
gyrB
DNA gyrase subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner (805 aa)
              0.466
ABP77556.1
KEGG- shm-Shewmr7_3906 hypothetical protein (314 aa)
   
          0.464
ABP75405.1
KEGG- she-Shewmr4_1565 multi-sensor signal transduction histidine kinase; TIGRFAM- PAS sensor protein; PFAM- ATP-binding region, ATPase domain protein domain protein; PAS fold-4 domain protein; SMART- PAS domain containing protein (879 aa)
   
          0.450
recF
DNA replication and repair protein RecF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP (360 aa)
              0.446
ABP74324.1
PFAM- Ig domain protein, group 1 domain protein; KEGG- shm-Shewmr7_0493 Ig domain protein, group 1 domain protein (840 aa)
   
          0.430
Your Current Organism:
Shewanella putrefaciens
NCBI taxonomy Id: 319224
Other names: S. putrefaciens CN-32, Shewanella putrefaciens, Shewanella putrefaciens CN-32, Shewanella putrefaciens str. CN-32, Shewanella putrefaciens strain CN-32
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