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glyS protein (Shewanella putrefaciens) - STRING interaction network
"glyS" - KEGG: she:Shewmr4_0008 glycyl-tRNA synthetase, beta subunit in Shewanella putrefaciens
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Score
glySKEGG- she-Shewmr4_0008 glycyl-tRNA synthetase, beta subunit (689 aa)    
Predicted Functional Partners:
glyQ
PFAM- glycyl-tRNA synthetase, alpha subunit; KEGG- shm-Shewmr7_0009 glycyl-tRNA synthetase, alpha subunit (301 aa)
  0.999
aspS
Aspartate--tRNA ligase; Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction- L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily (592 aa)
   
   
  0.753
ileS
Isoleucine--tRNA ligase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as ’pretransfer’ editing and involves the hydrolysis of activated Val-AMP. The other activity is designated ’posttransfer’ editing and involves deacylation of mischarged Val-tRNA(Ile); Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 1 subfamily (940 aa)
 
   
  0.719
atpB
ATP synthase subunit a; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane (273 aa)
   
        0.703
ABP73744.1
KEGG- shm-Shewmr7_0010 DNA-3-methyladenine glycosylase I; TIGRFAM- DNA-3-methyladenine glycosylase I; PFAM- methyladenine glycosylase (198 aa)
              0.703
pheT
KEGG- she-Shewmr4_1809 phenylalanyl-tRNA synthetase, beta subunit; TIGRFAM- phenylalanyl-tRNA synthetase, beta subunit (795 aa)
 
   
  0.664
yidC
Membrane protein insertase YidC; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins (541 aa)
   
   
  0.604
serS
Serine--tRNA ligase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) (428 aa)
   
   
  0.598
gyrB
DNA gyrase subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner (805 aa)
   
 
  0.589
argS
Arginine--tRNA ligase; KEGG- shm-Shewmr7_0456 arginyl-tRNA synthetase; TIGRFAM- arginyl-tRNA synthetase (581 aa)
         
  0.580
Your Current Organism:
Shewanella putrefaciens
NCBI taxonomy Id: 319224
Other names: S. putrefaciens CN-32, Shewanella putrefaciens, Shewanella putrefaciens CN-32, Shewanella putrefaciens str. CN-32, Shewanella putrefaciens strain CN-32
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