STRINGSTRING
ABP73753.1 protein (Shewanella putrefaciens) - STRING interaction network
"ABP73753.1" - KEGG: shm:Shewmr7_0020 protoporphyrinogen oxidase in Shewanella putrefaciens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABP73753.1KEGG- shm-Shewmr7_0020 protoporphyrinogen oxidase (174 aa)    
Predicted Functional Partners:
ABP76017.1
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX; Belongs to the ferrochelatase family (347 aa)
 
   
  0.925
ABP77619.1
Coproporphyrinogen-III oxidase; KEGG- son-SO4730 oxygen-independent coproporphyrinogen III oxidase; TIGRFAM- oxygen-independent coproporphyrinogen III oxidase; PFAM- Radical SAM domain protein; HemN domain protein; SMART- Elongator protein 3/MiaB/NifB; Belongs to the anaerobic coproporphyrinogen-III oxidase family (446 aa)
   
   
  0.925
ABP76402.1
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX; Belongs to the ferrochelatase family (337 aa)
 
   
  0.923
ABP77215.1
PFAM- Radical SAM domain protein; HemN domain protein; SMART- Elongator protein 3/MiaB/NifB; KEGG- son-SO4520 coproporphyrinogen III oxidase (445 aa)
   
   
  0.919
hemF
Oxygen-dependent coproporphyrinogen-III oxidase; Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen-IX (302 aa)
         
  0.918
ABP77347.1
Mg chelatase, subunit ChlI; KEGG- son-SO0349 magnesium chelatase family protein; TIGRFAM- Mg chelatase, subunit ChlI; PFAM- magnesium chelatase, ChlI subunit; ATPase associated with various cellular activities, AAA_5; SMART- AAA ATPase (509 aa)
         
    0.900
ABP73752.1
Trk system potassium uptake protein; Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA (485 aa)
            0.880
ABP73755.1
KEGG- she-Shewmr4_0024 protoporphyrinogen oxidase (184 aa)
   
   
0.819
ABP76751.1
KEGG- shm-Shewmr7_0906 protoporphyrinogen oxidase (173 aa)
   
   
0.810
ABP73751.1
PFAM- protein of unknown function UPF0029; KEGG- shm-Shewmr7_0018 protein of unknown function UPF0029 (204 aa)
       
  0.698
Your Current Organism:
Shewanella putrefaciens
NCBI taxonomy Id: 319224
Other names: S. putrefaciens CN-32, Shewanella putrefaciens, Shewanella putrefaciens CN-32, Shewanella putrefaciens str. CN-32, Shewanella putrefaciens strain CN-32
Server load: low (8%) [HD]