STRINGSTRING
ABP73771.1 protein (Shewanella putrefaciens) - STRING interaction network
"ABP73771.1" - PFAM: protein of unknown function UPF0153 in Shewanella putrefaciens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABP73771.1PFAM- protein of unknown function UPF0153; KEGG- son-SO0044 hypothetical protein (84 aa)    
Predicted Functional Partners:
ABP73772.1
TIGRFAM- putative transcriptional regulator, Rrf2 family; PFAM- protein of unknown function UPF0074; KEGG- she-Shewmr4_0041 transcriptional regulator, BadM/Rrf2 family (151 aa)
              0.775
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5’-3’ exonuclease activity (922 aa)
   
   
  0.405
Your Current Organism:
Shewanella putrefaciens
NCBI taxonomy Id: 319224
Other names: S. putrefaciens CN-32, Shewanella putrefaciens, Shewanella putrefaciens CN-32, Shewanella putrefaciens str. CN-32, Shewanella putrefaciens strain CN-32
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