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ABP73800.1 protein (Shewanella putrefaciens) - STRING interaction network
"ABP73800.1" - PFAM: HPP family protein+B94 in Shewanella putrefaciens
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABP73800.1PFAM- HPP family protein+B94; KEGG- shm-Shewmr7_0079 HPP family protein (182 aa)    
Predicted Functional Partners:
ABP73799.1
PFAM- thioesterase superfamily protein; KEGG- shm-Shewmr7_0078 thioesterase superfamily protein (136 aa)
              0.539
ABP75176.1
PFAM- Integral membrane protein TerC; KEGG- son-SO1747 membrane protein, putative (328 aa)
     
        0.518
ABP76934.1
Transcriptional regulator, LysR family; PFAM- regulatory protein, LysR; LysR, substrate-binding; KEGG- shm-Shewmr7_0611 transcriptional regulator, LysR family (302 aa)
     
        0.501
ABP76501.1
Transcriptional regulator, LysR family; PFAM- regulatory protein, LysR; LysR, substrate-binding; KEGG- shm-Shewmr7_1157 transcriptional regulator, LysR family (320 aa)
     
        0.501
ABP75471.1
Transcriptional regulator, LysR family; PFAM- regulatory protein, LysR; LysR, substrate-binding; KEGG- son-SO2202 transcriptional regulator, LysR family (282 aa)
   
        0.404
ABP77329.1
Transcriptional regulator, LysR family; PFAM- regulatory protein, LysR; LysR, substrate-binding; KEGG- shm-Shewmr7_0340 transcriptional regulator, LysR family (298 aa)
     
        0.400
ABP75896.1
Transcriptional regulator, LysR family; PFAM- regulatory protein, LysR; LysR, substrate-binding; KEGG- shm-Shewmr7_2192 transcriptional regulator, LysR family (292 aa)
     
        0.400
ABP75541.1
Transcriptional regulator, LysR family; PFAM- regulatory protein, LysR; LysR, substrate-binding; KEGG- pae-PA2316 probable transcriptional regulator (297 aa)
     
        0.400
ABP73847.1
Transcriptional regulator, LysR family; PFAM- regulatory protein, LysR; LysR, substrate-binding; KEGG- yps-YPTB1207 putative transcriptional regulator, LysR family (320 aa)
     
        0.400
Your Current Organism:
Shewanella putrefaciens
NCBI taxonomy Id: 319224
Other names: S. putrefaciens CN-32, Shewanella putrefaciens, Shewanella putrefaciens CN-32, Shewanella putrefaciens str. CN-32, Shewanella putrefaciens strain CN-32
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