STRINGSTRING
ABP73803.1 protein (Shewanella putrefaciens) - STRING interaction network
"ABP73803.1" - PFAM: glutathione-dependent formaldehyde-activating, GFA in Shewanella putrefaciens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABP73803.1PFAM- glutathione-dependent formaldehyde-activating, GFA; KEGG- shm-Shewmr7_0084 glutathione-dependent formaldehyde-activating, GFA (131 aa)    
Predicted Functional Partners:
ABP73802.1
PFAM- thioesterase superfamily protein; KEGG- shm-Shewmr7_0081 thioesterase superfamily protein (146 aa)
   
        0.599
ABP76812.1
Bifunctional protein PutA; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family (1064 aa)
         
  0.529
ABP74864.1
PFAM- glutamine amidotransferase, class-II; glutamate synthase, alpha subunit domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase; KEGG- shm-Shewmr7_2954 glutamate synthase (ferredoxin) (1482 aa)
         
  0.523
ABP73801.1
KEGG- she-Shewmr4_0083 hypothetical protein (88 aa)
              0.455
ABP73804.1
KEGG- sdn-Sden_0075 hypothetical protein (374 aa)
              0.403
Your Current Organism:
Shewanella putrefaciens
NCBI taxonomy Id: 319224
Other names: S. putrefaciens CN-32, Shewanella putrefaciens, Shewanella putrefaciens CN-32, Shewanella putrefaciens str. CN-32, Shewanella putrefaciens strain CN-32
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