STRINGSTRING
ABP73809.1 protein (Shewanella putrefaciens) - STRING interaction network
"ABP73809.1" - KEGG: son:SO0090 hypothetical protein in Shewanella putrefaciens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABP73809.1KEGG- son-SO0090 hypothetical protein (178 aa)    
Predicted Functional Partners:
prmA
Ribosomal protein L11 methyltransferase; Methylates ribosomal protein L11 (293 aa)
 
            0.709
ABP76233.1
PFAM- histone family protein nucleoid-structuring protein H-NS; KEGG- shm-Shewmr7_1416 histone family protein nucleoid-structuring protein H-NS; Belongs to the histone-like protein H-NS family (130 aa)
   
        0.659
ppnP
Pyrimidine/purine nucleoside phosphorylase; Catalyzes the phosphorolysis of diverse nucleosides, yielding D-ribose 1-phosphate and the respective free bases. Can use uridine, adenosine, guanosine, cytidine, thymidine, inosine and xanthosine as substrates. Also catalyzes the reverse reactions (103 aa)
     
        0.647
ABP75517.1
PFAM- glutamine amidotransferase, class-II; KEGG- shm-Shewmr7_2222 glutamine amidotransferase, class-II (259 aa)
     
        0.645
ABP73810.1
KEGG- shm-Shewmr7_0143 hypothetical protein (118 aa)
              0.551
ABP77068.1
Transcriptional regulator, CadC; PFAM- transcriptional regulator domain protein; KEGG- shm-Shewmr7_3532 transcriptional regulator, CadC (427 aa)
   
          0.536
ABP75204.1
Uncharacterized protein; KEGG- son-SO1779 decaheme cytochrome c (833 aa)
   
          0.489
ABP74356.1
KEGG- son-SO1428 outer membrane protein (662 aa)
   
          0.483
ABP73808.1
annotation not available (114 aa)
              0.453
ABP77075.1
SMART- Rhodanese domain protein; KEGG- shm-Shewmr7_3541 rhodanese domain protein (146 aa)
 
        0.441
Your Current Organism:
Shewanella putrefaciens
NCBI taxonomy Id: 319224
Other names: S. putrefaciens CN-32, Shewanella putrefaciens, Shewanella putrefaciens CN-32, Shewanella putrefaciens str. CN-32, Shewanella putrefaciens strain CN-32
Server load: low (12%) [HD]