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rsmJ protein (Shewanella putrefaciens) - STRING interaction network
"rsmJ" - Ribosomal RNA small subunit methyltransferase J in Shewanella putrefaciens
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second shell of interactors
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proteins of unknown 3D structure
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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rsmJRibosomal RNA small subunit methyltransferase J; Specifically methylates the guanosine in position 1516 of 16S rRNA (259 aa)    
Predicted Functional Partners:
ABP73823.1
PFAM- peptidase M3A and M3B, thimet/oligopeptidase F; KEGG- son-SO4699 oligopeptidase A (679 aa)
 
   
  0.843
tig
Trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily (434 aa)
     
        0.553
era
GTPase Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism (338 aa)
   
        0.528
ABP73835.1
Diguanylate cyclase/phosphodiesterase; PFAM- GGDEF domain containing protein; EAL domain protein; KEGG- pat-Patl_2246 diguanylate cyclase/phosphodiesterase (754 aa)
              0.504
trmA
tRNA/tmRNA (uracil-C(5))-methyltransferase; Dual-specificity methyltransferase that catalyzes the formation of 5-methyluridine at position 54 (m5U54) in all tRNAs, and that of position 341 (m5U341) in tmRNA (transfer-mRNA) (366 aa)
 
        0.486
ABP75502.1
PFAM- Methyltransferase type 11; KEGG- she-Shewmr4_2160 methyltransferase type 11 (244 aa)
     
   
  0.478
rlmJ
Ribosomal RNA large subunit methyltransferase J; Specifically methylates the adenine in position 2030 of 23S rRNA (281 aa)
         
  0.478
mnmC
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC; Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34; In the N-terminal section; belongs to the methyltransferase superfamily. tRNA (mnm(5)s(2)U34)- methyltransferase family (680 aa)
 
        0.452
rpsF
30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA (131 aa)
   
        0.442
ABP77326.1
PFAM- protein of unknown function UPF0153; KEGG- she-Shewmr4_0357 protein of unknown function UPF0153 (155 aa)
 
        0.442
Your Current Organism:
Shewanella putrefaciens
NCBI taxonomy Id: 319224
Other names: S. putrefaciens CN-32, Shewanella putrefaciens, Shewanella putrefaciens CN-32, Shewanella putrefaciens str. CN-32, Shewanella putrefaciens strain CN-32
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