STRINGSTRING
ABP73853.1 protein (Shewanella putrefaciens) - STRING interaction network
"ABP73853.1" - PFAM: protein of unknown function DUF1090 in Shewanella putrefaciens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABP73853.1PFAM- protein of unknown function DUF1090; KEGG- son-SO0119 hypothetical protein (130 aa)    
Predicted Functional Partners:
ABP75045.1
PFAM- transport-associated; SMART- Transport-associated and nodulation region, bacteria; KEGG- shm-Shewmr7_2744 transport-associated (181 aa)
   
        0.740
ABP75411.1
PFAM- PrkA serine kinase; PrkA AAA domain protein; KEGG- shm-Shewmr7_1646 putative serine protein kinase, PrkA (644 aa)
     
        0.710
ABP73852.1
PFAM- Redoxin domain protein; KEGG- ppr-PBPRB1492 hypothetical thioredoxin (174 aa)
              0.694
ABP73761.1
PFAM- Peptidoglycan-binding LysM; KEGG- shm-Shewmr7_0028 peptidoglycan-binding LysM (374 aa)
     
        0.664
ABP76598.1
PFAM- Ferritin, Dps family protein; KEGG- shm-Shewmr7_1046 ferritin, Dps family protein; Belongs to the Dps family (155 aa)
     
        0.661
ABP73851.1
PFAM- DSBA oxidoreductase; KEGG- vfi-VF2492 copper sensitivity protein ScsC (274 aa)
              0.628
ABP74032.1
PFAM- fimbrial biogenesis outer membrane usher protein; KEGG- pae-PA2130 probable fimbrial biogenesis usher protein (850 aa)
 
          0.624
ABP74481.1
PFAM- major facilitator superfamily MFS_1; KEGG- she-Shewmr4_3262 major facilitator superfamily MFS_1 (481 aa)
   
          0.624
ABP74034.1
PFAM- pili assembly chaperone; KEGG- rme-Rmet_1663 pili assembly chaperone (244 aa)
   
          0.612
ABP74031.1
PFAM- pili assembly chaperone; KEGG- ypn-YPN_0086 fimbrial chaperone (242 aa)
   
          0.604
Your Current Organism:
Shewanella putrefaciens
NCBI taxonomy Id: 319224
Other names: S. putrefaciens CN-32, Shewanella putrefaciens, Shewanella putrefaciens CN-32, Shewanella putrefaciens str. CN-32, Shewanella putrefaciens strain CN-32
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