STRINGSTRING
ABP73899.1 protein (Shewanella putrefaciens) - STRING interaction network
"ABP73899.1" - annotation not available in Shewanella putrefaciens
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABP73899.1annotation not available (222 aa)    
Predicted Functional Partners:
ABP73898.1
KEGG- xcb-XC_1208 hypothetical protein (204 aa)
   
        0.563
ABP73896.1
PFAM- restriction modification system DNA specificity domain; KEGG- tde-TDE0368 type I restriction-modification system, S subunit, putative (399 aa)
   
        0.507
ABP73897.1
TIGRFAM- type I restriction-modification system, M subunit; PFAM- N-6 DNA methylase; KEGG- dvu-DVU1709 type I restriction-modification system, M subunit (506 aa)
   
        0.435
truB
tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs (318 aa)
     
        0.432
ABP74825.1
PFAM- binding-protein-dependent transport systems inner membrane component; KEGG- shm-Shewmr7_2997 binding-protein-dependent transport systems inner membrane component (271 aa)
     
        0.431
ABP73893.1
Type I restriction enzyme R Protein; Subunit R is required for both nuclease and ATPase activities, but not for modification (1096 aa)
              0.424
ABP73895.1
KEGG- dra-DR1808 deoxyguanosinetriphosphate triphosphohydrolase-related protein; TIGRFAM- putative deoxyguanosinetriphosphate triphosphohydrolase; PFAM- metal-dependent phosphohydrolase, HD sub domain; SMART- metal-dependent phosphohydrolase, HD region; Belongs to the dGTPase family. Type 2 subfamily (462 aa)
              0.421
ABP73894.1
PFAM- KAP P-loop domain protein; KEGG- vpa-VP2903 hypothetical protein (445 aa)
              0.421
ABP73892.1
PFAM- protein of unknown function DUF45; KEGG- yps-YPTB3878 putative predicted metal-dependent hydrolase (270 aa)
              0.420
ABP73891.1
SMART- AAA ATPase; KEGG- bps-BPSL3342 putative bacteriophage protein (544 aa)
              0.420
Your Current Organism:
Shewanella putrefaciens
NCBI taxonomy Id: 319224
Other names: S. putrefaciens CN-32, Shewanella putrefaciens, Shewanella putrefaciens CN-32, Shewanella putrefaciens str. CN-32, Shewanella putrefaciens strain CN-32
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