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ABP73913.1 protein (Shewanella putrefaciens) - STRING interaction network
"ABP73913.1" - TIGRFAM: prevent-host-death family protein in Shewanella putrefaciens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABP73913.1TIGRFAM- prevent-host-death family protein; KEGG- vpa-VP1886 hypothetical protein (85 aa)    
Predicted Functional Partners:
ABP73912.1
Uncharacterized protein; KEGG- psp-PSPPH_A0095 plasmid stabilization system protein, RelE/ParE family (115 aa)
              0.861
ABP73910.1
PFAM- transposase IS3/IS911 family protein; KEGG- vpa-VP1788 putative transposase (94 aa)
 
          0.548
ABP73911.1
Putative prophage repressor; PFAM- peptidase S24, S26A and S26B; KEGG- son-SOA0013 umuD protein (141 aa)
         
  0.504
Your Current Organism:
Shewanella putrefaciens
NCBI taxonomy Id: 319224
Other names: S. putrefaciens CN-32, Shewanella putrefaciens, Shewanella putrefaciens CN-32, Shewanella putrefaciens str. CN-32, Shewanella putrefaciens strain CN-32
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