STRINGSTRING
ABP73930.1 protein (Shewanella putrefaciens) - STRING interaction network
"ABP73930.1" - TIGRFAM: Cd(II)/Pb(II)-responsive transcriptional regulator in Shewanella putrefaciens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABP73930.1TIGRFAM- Cd(II)/Pb(II)-responsive transcriptional regulator; PFAM- regulatory protein, MerR; KEGG- abo-ABO_1367 transcriptional regulator, MerR family (135 aa)    
Predicted Functional Partners:
ABP73933.1
PFAM- transposase, IS204/IS1001/IS1096/IS1165 family protein; KEGG- bxe-Bxe_C0885 transposase, TnpA (429 aa)
 
          0.802
ABP73931.1
KEGG- abo-ABO_1368 cation efflux system permease, putative (298 aa)
 
     
  0.782
ABP73932.1
KEGG- bxe-Bxe_C0884 lipoprotein signal peptidase LspA; TIGRFAM- lipoprotein signal peptidase; PFAM- peptidase A8, signal peptidase II (170 aa)
 
     
  0.769
ABP73959.1
PFAM- transposase, IS204/IS1001/IS1096/IS1165 family protein; KEGG- bxe-Bxe_C0885 transposase, TnpA (429 aa)
 
          0.573
ABP76854.1
Histidine kinase; KEGG- shm-Shewmr7_3307 multi-sensor hybrid histidine kinase; TIGRFAM- PAS sensor protein; PFAM- response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; Hpt domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART- PAS domain containing protein; PAC repeat-containing protein (1771 aa)
   
 
  0.535
ABP73957.1
KEGG- abo-ABO_1368 cation efflux system permease, putative (298 aa)
 
     
  0.478
ABP73958.1
Lipoprotein signal peptidase; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family (170 aa)
 
     
  0.447
Your Current Organism:
Shewanella putrefaciens
NCBI taxonomy Id: 319224
Other names: S. putrefaciens CN-32, Shewanella putrefaciens, Shewanella putrefaciens CN-32, Shewanella putrefaciens str. CN-32, Shewanella putrefaciens strain CN-32
Server load: low (10%) [HD]