STRINGSTRING
ABP73951.1 protein (Shewanella putrefaciens) - STRING interaction network
"ABP73951.1" - PFAM: IS1 transposase in Shewanella putrefaciens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABP73951.1PFAM- IS1 transposase; KEGG- sec-SC1834 IS1 transposase (113 aa)    
Predicted Functional Partners:
ABP73952.1
PFAM- Insertion element protein; KEGG- sec-SC062 transposition protein (91 aa)
   
  0.974
ABP73950.1
PFAM- transposase, IS4 family protein; KEGG- sgl-SG1040 transposase (307 aa)
 
          0.726
ABP73992.1
Sensor protein; Member of a two-component regulatory system (491 aa)
   
          0.719
ABP76623.1
KEGG- eca-ECA0367 putative DNA-binding protein (138 aa)
   
          0.707
ABP73995.1
KEGG- ecj-JW0562 periplasmic copper-binding protein (117 aa)
   
          0.698
ABP73953.1
PFAM- phage integrase family protein; KEGG- ecc-c0291 hypothetical protein (200 aa)
   
        0.573
ABP76973.1
KEGG- son-SO4020 transcriptional regulator, LysR family (140 aa)
   
          0.557
ABP73994.1
TIGRFAM- RND efflux system, outer membrane lipoprotein, NodT family; PFAM- outer membrane efflux protein; KEGG- ecs-ECs0610 putative copper efflux system outer membrane protein CusC (461 aa)
   
          0.537
ABP76136.1
PFAM- ferric iron reductase; KEGG- son-SO3034 ferric iron reductase protein, putative (374 aa)
   
          0.534
ABP73949.1
PFAM- PTS system sorbose subfamily IIB component; KEGG- bsu-BG10317 PTS fructose-specific enzyme IIB component (104 aa)
              0.503
Your Current Organism:
Shewanella putrefaciens
NCBI taxonomy Id: 319224
Other names: S. putrefaciens CN-32, Shewanella putrefaciens, Shewanella putrefaciens CN-32, Shewanella putrefaciens str. CN-32, Shewanella putrefaciens strain CN-32
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