STRINGSTRING
ABP73968.1 protein (Shewanella putrefaciens) - STRING interaction network
"ABP73968.1" - PFAM: protein of unknown function UPF0060 in Shewanella putrefaciens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABP73968.1PFAM- protein of unknown function UPF0060; KEGG- abo-ABO_1373 hypothetical protein (117 aa)    
Predicted Functional Partners:
ABP73967.1
TIGRFAM- cation diffusion facilitator family transporter; PFAM- cation efflux protein; KEGG- tcx-Tcr_1429 cation diffusion facilitator family transporter (302 aa)
              0.851
ABP73966.1
TIGRFAM- Cd(II)/Pb(II)-responsive transcriptional regulator; PFAM- regulatory protein, MerR; KEGG- sde-Sde_1961 putative transcriptional regulator, MerR family (154 aa)
              0.746
ABP73965.1
KEGG- abo-ABO_1368 cation efflux system permease, putative (301 aa)
              0.565
ABP73969.1
annotation not available (129 aa)
              0.516
ABP73970.1
annotation not available (136 aa)
              0.462
ABP73964.1
annotation not available (121 aa)
              0.406
Your Current Organism:
Shewanella putrefaciens
NCBI taxonomy Id: 319224
Other names: S. putrefaciens CN-32, Shewanella putrefaciens, Shewanella putrefaciens CN-32, Shewanella putrefaciens str. CN-32, Shewanella putrefaciens strain CN-32
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