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ABP73981.1 protein (Shewanella putrefaciens) - STRING interaction network
"ABP73981.1" - PFAM: transposase, IS4 family protein in Shewanella putrefaciens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABP73981.1PFAM- transposase, IS4 family protein; KEGG- plu-plu3796 hypothetical protein (367 aa)    
Predicted Functional Partners:
ABP73991.1
Uncharacterized protein; KEGG- son-SO2129 transposase, putative (93 aa)
   
          0.710
ABP75707.1
KEGG- vch-VCA0487 hypothetical protein (171 aa)
   
          0.507
ABP73982.1
KEGG- sfr-Sfri_1967 hypothetical protein (140 aa)
              0.502
ABP73952.1
PFAM- Insertion element protein; KEGG- sec-SC062 transposition protein (91 aa)
   
          0.447
ABP74008.1
PFAM- RNA-directed DNA polymerase (Reverse transcriptase); Group II intron, maturase-specific domain protein; KEGG- sme-SMb21045 putative reverse transcriptasematurase protein (354 aa)
   
          0.403
Your Current Organism:
Shewanella putrefaciens
NCBI taxonomy Id: 319224
Other names: S. putrefaciens CN-32, Shewanella putrefaciens, Shewanella putrefaciens CN-32, Shewanella putrefaciens str. CN-32, Shewanella putrefaciens strain CN-32
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