STRINGSTRING
ABP73990.1 protein (Shewanella putrefaciens) - STRING interaction network
"ABP73990.1" - PFAM: outer membrane porin in Shewanella putrefaciens
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABP73990.1PFAM- outer membrane porin; KEGG- wsu-WS0983 hypothetical protein (406 aa)    
Predicted Functional Partners:
ABP73971.1
KEGG- ppr-PBPRA1708 hypothetical protein (301 aa)
   
          0.773
ABP77540.1
KEGG- mhu-Mhun_0869 hypothetical protein (177 aa)
   
          0.754
ABP73798.1
KEGG- she-Shewmr4_0079 MORN variant repeat protein (818 aa)
   
          0.726
ABP74940.1
KEGG- mhu-Mhun_0869 hypothetical protein (162 aa)
   
          0.725
ABP76714.1
KEGG- she-Shewmr4_0079 MORN variant repeat protein (684 aa)
   
          0.724
ABP76889.1
KEGG- son-SO0813 hypothetical protein (480 aa)
   
          0.714
ABP74566.1
KEGG- shm-Shewmr7_0831 hypothetical protein (746 aa)
   
          0.711
ABP76388.1
PFAM- GCN5-related N-acetyltransferase; KEGG- son-SO3328 acetyltransferase, GNAT family (152 aa)
   
          0.710
ABP74935.1
KEGG- shm-Shewmr7_2878 hypothetical protein (533 aa)
   
          0.710
ABP74922.1
KEGG- shm-Shewmr7_2893 hypothetical protein (296 aa)
   
          0.709
Your Current Organism:
Shewanella putrefaciens
NCBI taxonomy Id: 319224
Other names: S. putrefaciens CN-32, Shewanella putrefaciens, Shewanella putrefaciens CN-32, Shewanella putrefaciens str. CN-32, Shewanella putrefaciens strain CN-32
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