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ABP74021.1 protein (Shewanella putrefaciens) - STRING interaction network
"ABP74021.1" - Ribosomal RNA small subunit methyltransferase D in Shewanella putrefaciens
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second shell of interactors
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proteins of unknown 3D structure
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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ABP74021.1Ribosomal RNA small subunit methyltransferase D; Specifically methylates the guanine in position 966 of 16S rRNA in the assembled 30S particle (221 aa)    
Predicted Functional Partners:
ABP74020.1
PFAM- protein of unknown function DUF1145; KEGG- son-SO4588 hypothetical protein (91 aa)
              0.861
coaD
Phosphopantetheine adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4’- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate; Belongs to the bacterial CoaD family (163 aa)
 
        0.769
ABP74024.1
Cell division protein FtsX; Part of the ABC transporter FtsEX involved in cellular division (321 aa)
     
      0.703
ftsY
Signal recognition particle receptor FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components (482 aa)
   
   
  0.688
ABP74023.1
KEGG- shm-Shewmr7_3846 cell division ATP-binding protein FtsE; TIGRFAM- cell division ATP-binding protein FtsE; PFAM- ABC transporter related; SMART- AAA ATPase (238 aa)
   
      0.685
tig
Trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily (434 aa)
   
        0.650
prmC
Release factor glutamine methyltransferase; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif (282 aa)
 
   
  0.626
rpoH
TIGRFAM- RNA polymerase sigma factor RpoH; PFAM- sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; KEGG- shm-Shewmr7_3844 RNA polymerase, sigma 32 subunit, RpoH (285 aa)
   
 
  0.577
rsmC
Ribosomal RNA small subunit methyltransferase C; Specifically methylates the guanine in position 1207 of 16S rRNA in the 30S particle; Belongs to the methyltransferase superfamily. RsmC family (347 aa)
           
  0.537
rlmJ
Ribosomal RNA large subunit methyltransferase J; Specifically methylates the adenine in position 2030 of 23S rRNA (281 aa)
           
  0.531
Your Current Organism:
Shewanella putrefaciens
NCBI taxonomy Id: 319224
Other names: S. putrefaciens CN-32, Shewanella putrefaciens, Shewanella putrefaciens CN-32, Shewanella putrefaciens str. CN-32, Shewanella putrefaciens strain CN-32
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