STRINGSTRING
ABP74034.1 protein (Shewanella putrefaciens) - STRING interaction network
"ABP74034.1" - PFAM: pili assembly chaperone in Shewanella putrefaciens
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABP74034.1PFAM- pili assembly chaperone; KEGG- rme-Rmet_1663 pili assembly chaperone (244 aa)    
Predicted Functional Partners:
ABP74032.1
PFAM- fimbrial biogenesis outer membrane usher protein; KEGG- pae-PA2130 probable fimbrial biogenesis usher protein (850 aa)
 
  0.955
ABP74030.1
PFAM- Fimbrial protein; KEGG- bam-Bamb_2833 fimbrial protein (180 aa)
 
 
  0.922
ABP74033.1
KEGG- pau-PA14_59750 fimbrial subunit (456 aa)
 
 
  0.892
ABP74026.1
PFAM- Fimbrial protein; KEGG- bam-Bamb_2833 fimbrial protein (180 aa)
 
 
  0.862
ABP74029.1
KEGG- pau-PA14_59750 fimbrial subunit (447 aa)
 
 
  0.792
ABP74027.1
KEGG- yps-YPTB0157 hypothetical protein (457 aa)
 
 
  0.785
ABP74031.1
PFAM- pili assembly chaperone; KEGG- ypn-YPN_0086 fimbrial chaperone (242 aa)
 
       
0.637
ABP73853.1
PFAM- protein of unknown function DUF1090; KEGG- son-SO0119 hypothetical protein (130 aa)
   
          0.612
ABP75750.1
PFAM- beta-lactamase; KEGG- shm-Shewmr7_2039 beta-lactamase (394 aa)
   
          0.601
ABP74035.1
Histidine kinase; KEGG- psb-Psyr_2113 PAS; TIGRFAM- PAS sensor protein; PFAM- response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; Hpt domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART- PAS domain containing protein; extracellular solute-binding protein, family 3 (1196 aa)
   
     
  0.461
Your Current Organism:
Shewanella putrefaciens
NCBI taxonomy Id: 319224
Other names: S. putrefaciens CN-32, Shewanella putrefaciens, Shewanella putrefaciens CN-32, Shewanella putrefaciens str. CN-32, Shewanella putrefaciens strain CN-32
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