STRINGSTRING
ABP74105.1 protein (Shewanella putrefaciens) - STRING interaction network
"ABP74105.1" - KEGG: shm:Shewmr7_3762 hypothetical protein in Shewanella putrefaciens
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABP74105.1KEGG- shm-Shewmr7_3762 hypothetical protein (179 aa)    
Predicted Functional Partners:
ABP74104.1
Signal transduction histidine kinase, nitrogen specific, NtrB; PFAM- ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; PAS fold-4 domain protein; KEGG- shm-Shewmr7_3763 signal transduction histidine kinase, nitrogen specific, NtrB (348 aa)
   
        0.679
ABP73761.1
PFAM- Peptidoglycan-binding LysM; KEGG- shm-Shewmr7_0028 peptidoglycan-binding LysM (374 aa)
   
          0.614
ABP77416.1
PFAM- Pilus assembly protein, PilQ; KEGG- shm-Shewmr7_0245 pilus assembly protein, PilQ (172 aa)
   
          0.577
ABP77417.1
PFAM- Pilus assembly protein, PilO; KEGG- shm-Shewmr7_0244 pilus assembly protein, PilO (208 aa)
   
          0.567
ABP74106.1
KEGG- sdn-Sden_1385 glutathione S-transferase-like protein (120 aa)
 
          0.553
ABP77418.1
PFAM- Fimbrial assembly family protein; KEGG- shm-Shewmr7_0243 fimbrial assembly family protein (194 aa)
   
          0.538
ABP74797.1
KEGG- shm-Shewmr7_3029 methylation site containing protein (161 aa)
   
          0.516
ABP74103.1
KEGG- shm-Shewmr7_3764 nitrogen metabolism transcriptional regulator, NtrC, fis family; TIGRFAM- nitrogen regulation protein NR(I); PFAM- response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; ATPase associated with various cellular activities, AAA_5; SMART- AAA ATPase (470 aa)
              0.493
ABP77400.1
PFAM- LppC family lipoprotein; KEGG- she-Shewmr4_3684 LppC family lipoprotein (616 aa)
   
          0.483
ABP75750.1
PFAM- beta-lactamase; KEGG- shm-Shewmr7_2039 beta-lactamase (394 aa)
           
  0.457
Your Current Organism:
Shewanella putrefaciens
NCBI taxonomy Id: 319224
Other names: S. putrefaciens CN-32, Shewanella putrefaciens, Shewanella putrefaciens CN-32, Shewanella putrefaciens str. CN-32, Shewanella putrefaciens strain CN-32
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