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ABP74132.1 protein (Shewanella putrefaciens) - STRING interaction network
"ABP74132.1" - PFAM: protein of unknown function UPF0057 in Shewanella putrefaciens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABP74132.1PFAM- protein of unknown function UPF0057; KEGG- shm-Shewmr7_3736 protein of unknown function UPF0057 (55 aa)    
Predicted Functional Partners:
ABP74131.1
TIGRFAM- pseudouridine synthase Rlu family protein, TIGR01621; PFAM- pseudouridine synthase; KEGG- she-Shewmr4_0283 pseudouridine synthase Rlu family protein, TIGR01621 (229 aa)
              0.550
ABP74130.1
Integral membrane sensor signal transduction histidine kinase; PFAM- ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG- son-SO4427 sensor histidine kinase (418 aa)
              0.482
ABP75051.1
KEGG- shm-Shewmr7_2736 2-nitropropane dioxygenase, NPD (552 aa)
 
          0.420
ABP74129.1
Two component transcriptional regulator, winged helix family; PFAM- response regulator receiver; transcriptional regulator domain protein; KEGG- son-SO4428 DNA-binding response regulator (225 aa)
              0.400
Your Current Organism:
Shewanella putrefaciens
NCBI taxonomy Id: 319224
Other names: S. putrefaciens CN-32, Shewanella putrefaciens, Shewanella putrefaciens CN-32, Shewanella putrefaciens str. CN-32, Shewanella putrefaciens strain CN-32
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