STRINGSTRING
ABP74135.1 protein (Shewanella putrefaciens) - STRING interaction network
"ABP74135.1" - PFAM: peptidase M23B in Shewanella putrefaciens
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABP74135.1PFAM- peptidase M23B; KEGG- son-SO4420 peptidase, M23/M37 family (170 aa)    
Predicted Functional Partners:
ABP74137.1
PFAM- CHAP domain containing protein; KEGG- son-SO4418 trypanothione synthetase domain protein (215 aa)
 
          0.761
ABP74136.1
KEGG- son-SO4419 hypothetical protein (192 aa)
              0.717
ABP73859.1
KEGG- shm-Shewmr7_0117 hypothetical protein (537 aa)
   
        0.480
ABP74139.1
PFAM- aminotransferase, class V; KEGG- shm-Shewmr7_3724 aminotransferase, class V (373 aa)
 
          0.476
Your Current Organism:
Shewanella putrefaciens
NCBI taxonomy Id: 319224
Other names: S. putrefaciens CN-32, Shewanella putrefaciens, Shewanella putrefaciens CN-32, Shewanella putrefaciens str. CN-32, Shewanella putrefaciens strain CN-32
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