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rpmG protein (Shewanella putrefaciens) - STRING interaction network
"rpmG" - PFAM: ribosomal protein L33 in Shewanella putrefaciens
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
rpmGPFAM- ribosomal protein L33; KEGG- shm-Shewmr7_0361 ribosomal protein L33; Belongs to the bacterial ribosomal protein bL33 family (57 aa)    
Predicted Functional Partners:
rpmB
PFAM- ribosomal protein L28; KEGG- shm-Shewmr7_0360 ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family (78 aa)
 
 
  0.998
rpsR
30S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit (75 aa)
 
 
  0.991
rpmA
PFAM- ribosomal protein L27; KEGG- son-SO3651 ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family (84 aa)
     
 
  0.991
rplX
50S ribosomal protein L24; One of two assembly initiator proteins, it binds directly to the 5’-end of the 23S rRNA, where it nucleates assembly of the 50S subunit (104 aa)
 
 
  0.990
rpmF
TIGRFAM- ribosomal protein L32; PFAM- ribosomal L32p protein; KEGG- shm-Shewmr7_2470 ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family (56 aa)
 
 
  0.990
rpsI
PFAM- ribosomal protein S9; KEGG- shm-Shewmr7_0679 ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family (130 aa)
   
 
  0.988
rpmJ
PFAM- ribosomal protein L36; KEGG- shm-Shewmr7_0215 ribosomal protein L36; Belongs to the bacterial ribosomal protein bL36 family (37 aa)
   
 
  0.988
rpsN
30S ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site (101 aa)
 
 
  0.986
rpsH
30S ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit (130 aa)
   
 
  0.985
rplU
50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20 (103 aa)
     
 
  0.985
Your Current Organism:
Shewanella putrefaciens
NCBI taxonomy Id: 319224
Other names: S. putrefaciens CN-32, Shewanella putrefaciens, Shewanella putrefaciens CN-32, Shewanella putrefaciens str. CN-32, Shewanella putrefaciens strain CN-32
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