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ABP74201.1 protein (Shewanella putrefaciens) - STRING interaction network
"ABP74201.1" - KEGG: she:Shewmr4_3590 ATP-dependent DNA helicase RecQ in Shewanella putrefaciens
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second shell of interactors
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proteins of unknown 3D structure
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some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
ABP74201.1KEGG- she-Shewmr4_3590 ATP-dependent DNA helicase RecQ; TIGRFAM- ATP-dependent DNA helicase, RecQ family; ATP-dependent DNA helicase RecQ; PFAM- helicase domain protein; HRDC domain protein; DEAD/DEAH box helicase domain protein; SMART- DEAD-like helicases-like (607 aa)    
Predicted Functional Partners:
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5’-3’ exonuclease activity (922 aa)
   
 
  0.868
deaD
ATP-dependent RNA helicase DeaD; DEAD-box RNA helicase involved in various cellular processes at low temperature, including ribosome biogenesis, mRNA degradation and translation initiation (640 aa)
 
 
0.842
ABP75746.1
KEGG- shm-Shewmr7_2030 ATP-dependent DNA helicase, RecQ family; TIGRFAM- ATP-dependent DNA helicase, RecQ family; PFAM- helicase domain protein; DEAD/DEAH box helicase domain protein; SMART- DEAD-like helicases-like (659 aa)
   
   
 
0.836
ABP74621.1
TIGRFAM- single-stranded-DNA-specific exonuclease RecJ; PFAM- phosphoesterase, RecJ domain protein; phosphoesterase, DHHA1; KEGG- shm-Shewmr7_3226 single-stranded-DNA-specific exonuclease RecJ (584 aa)
 
   
  0.813
topB
DNA topoisomerase 3; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5’-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3’-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA super [...] (708 aa)
 
 
  0.777
recA
Protein RecA; Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage (357 aa)
     
 
  0.741
recG
ATP-dependent DNA helicase RecG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3’- to 5’- polarity. Unwinds branched duplex DNA (Y-DNA) (696 aa)
   
 
  0.675
ABP75096.1
PFAM- SNF2-related protein; helicase domain protein; zinc finger, SWIM domain protein; SMART- DEAD-like helicases-like; KEGG- shm-Shewmr7_2687 SNF2-related protein (1073 aa)
   
 
  0.662
ABP77628.1
KEGG- rxy-Rxyl_1790 superfamily I DNA and RNA helicases and helicase subunits-like protein (1261 aa)
   
 
  0.643
ABP76971.1
KEGG- son-SO4019 hypothetical protein (900 aa)
   
 
  0.643
Your Current Organism:
Shewanella putrefaciens
NCBI taxonomy Id: 319224
Other names: S. putrefaciens CN-32, Shewanella putrefaciens, Shewanella putrefaciens CN-32, Shewanella putrefaciens str. CN-32, Shewanella putrefaciens strain CN-32
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