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rraA protein (Shewanella putrefaciens) - STRING interaction network
"rraA" - Regulator of ribonuclease activity A in Shewanella putrefaciens
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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rraARegulator of ribonuclease activity A; Globally modulates RNA abundance by binding to RNase E (Rne) and regulating its endonucleolytic activity. Can modulate Rne action in a substrate-dependent manner by altering the composition of the degradosome. Modulates RNA-binding and helicase activities of the degradosome (161 aa)    
Predicted Functional Partners:
ABP74239.1
PFAM- Arginase/agmatinase/formiminoglutamase; KEGG- she-Shewmr4_3550 arginase/agmatinase/formiminoglutamase; Belongs to the arginase family (354 aa)
         
  0.587
rhlE
ATP-dependent RNA helicase RhlE; DEAD-box RNA helicase involved in ribosome assembly. Has RNA-dependent ATPase activity and unwinds double-stranded RNA (550 aa)
       
 
  0.527
srmB
ATP-dependent RNA helicase SrmB; DEAD-box RNA helicase involved in the assembly of the 50S ribosomal subunit at low temperature. Exhibits RNA-stimulated ATP hydrolysis and RNA unwinding activity; Belongs to the DEAD box helicase family. SrmB subfamily (419 aa)
       
 
  0.527
rhlB
ATP-dependent RNA helicase RhlB; DEAD-box RNA helicase involved in RNA degradation. Has RNA-dependent ATPase activity and unwinds double-stranded RNA; Belongs to the DEAD box helicase family. RhlB subfamily (439 aa)
       
 
  0.511
ABP76437.1
PFAM- helicase domain protein; type III restriction enzyme, res subunit; DEAD/DEAH box helicase domain protein; SMART- DEAD-like helicases-like; KEGG- son-SO3388 ATP-dependent RNA helicase, DEAD box family; Belongs to the DEAD box helicase family (413 aa)
       
 
  0.511
ABP75262.1
PFAM- helicase domain protein; DEAD/DEAH box helicase domain protein; SMART- DEAD-like helicases-like; KEGG- she-Shewmr4_2444 DEAD/DEAH box helicase domain protein; Belongs to the DEAD box helicase family (449 aa)
       
 
  0.511
ABP74982.1
PFAM- helicase domain protein; DEAD/DEAH box helicase domain protein; SMART- DEAD-like helicases-like; KEGG- son-SO1501 ATP-dependent RNA helicase, DEAD box family; Belongs to the DEAD box helicase family (481 aa)
       
 
  0.511
ABP74923.1
PFAM- helicase domain protein; DEAD/DEAH box helicase domain protein; SMART- DEAD-like helicases-like; KEGG- shm-Shewmr7_2892 DEAD/DEAH box helicase domain protein; Belongs to the DEAD box helicase family (433 aa)
       
 
  0.511
deaD
ATP-dependent RNA helicase DeaD; DEAD-box RNA helicase involved in various cellular processes at low temperature, including ribosome biogenesis, mRNA degradation and translation initiation (640 aa)
       
 
  0.511
ABP76823.1
PFAM- helicase domain protein; DbpA, RNA-binding domain protein; DEAD/DEAH box helicase domain protein; SMART- DEAD-like helicases-like; KEGG- son-SO0897 ATP-dependent RNA helicase DbpA; Belongs to the DEAD box helicase family (458 aa)
       
 
  0.484
Your Current Organism:
Shewanella putrefaciens
NCBI taxonomy Id: 319224
Other names: S. putrefaciens CN-32, Shewanella putrefaciens, Shewanella putrefaciens CN-32, Shewanella putrefaciens str. CN-32, Shewanella putrefaciens strain CN-32
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