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ABP74269.1 protein (Shewanella putrefaciens) - STRING interaction network
"ABP74269.1" - KEGG: pat:Patl_1924 hypothetical protein in Shewanella putrefaciens
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABP74269.1KEGG- pat-Patl_1924 hypothetical protein (263 aa)    
Predicted Functional Partners:
ABP76514.1
KEGG- she-Shewmr4_1070 extracellular solute-binding protein, family 3 (271 aa)
   
          0.710
ABP76652.1
KEGG- son-SO1143 hypothetical protein (257 aa)
   
          0.595
ABP75189.1
KEGG- cps-CPS_2655 hypothetical protein (319 aa)
   
          0.594
ABP75343.1
KEGG- son-SO1839 hypothetical protein (268 aa)
   
          0.593
ABP76854.1
Histidine kinase; KEGG- shm-Shewmr7_3307 multi-sensor hybrid histidine kinase; TIGRFAM- PAS sensor protein; PFAM- response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; Hpt domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART- PAS domain containing protein; PAC repeat-containing protein (1771 aa)
   
   
  0.540
ABP76532.1
Cyclic diguanosine monophosphate-binding protein; Binds the second messenger bis-(3’-5’) cyclic dimeric guanosine monophosphate (c-di-GMP). Can bind two c-di-GMP molecules per monomer. May play a role in bacterial second- messenger regulated processes. Binding to c-di-GMP induces a conformational change of the C- and N-termini resulting in the exposure of a highly negative surface on one side of the protein to a possible effector protein (123 aa)
   
          0.536
ABP74864.1
PFAM- glutamine amidotransferase, class-II; glutamate synthase, alpha subunit domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase; KEGG- shm-Shewmr7_2954 glutamate synthase (ferredoxin) (1482 aa)
         
  0.520
ABP76694.1
KEGG- she-Shewmr4_0876 extracellular solute-binding protein, family 3 (285 aa)
   
          0.498
ABP76742.1
PFAM- ABC transporter related; SMART- AAA ATPase; KEGG- shm-Shewmr7_0917 ABC transporter related (241 aa)
   
 
  0.493
ABP75717.1
KEGG- shm-Shewmr7_1971 response regulator receiver modulated metal dependent phosphohydrolase (78 aa)
   
          0.486
Your Current Organism:
Shewanella putrefaciens
NCBI taxonomy Id: 319224
Other names: S. putrefaciens CN-32, Shewanella putrefaciens, Shewanella putrefaciens CN-32, Shewanella putrefaciens str. CN-32, Shewanella putrefaciens strain CN-32
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