STRINGSTRING
ABP74274.1 protein (Shewanella putrefaciens) - STRING interaction network
"ABP74274.1" - PFAM: protein of unknown function DUF465 in Shewanella putrefaciens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABP74274.1PFAM- protein of unknown function DUF465; KEGG- son-SO4134 hypothetical protein (70 aa)    
Predicted Functional Partners:
ABP76008.1
PFAM- Di-haem cytochrome c peroxidase; KEGG- son-SO2178 cytochrome c551 peroxidase (333 aa)
   
   
  0.618
ABP76896.1
PFAM- Alkaline phosphatase; KEGG- she-Shewmr4_3312 twin-arginine translocation pathway signal (587 aa)
     
        0.431
ABP75748.1
PFAM- protein of unknown function DUF839; KEGG- shm-Shewmr7_2034 twin-arginine translocation pathway signal (685 aa)
     
        0.431
ABP76529.1
PFAM- phospholipid/glycerol acyltransferase; KEGG- shm-Shewmr7_1121 phospholipid/glycerol acyltransferase (630 aa)
     
        0.406
ABP77491.1
PFAM- cytochrome c oxidase assembly protein CtaG/Cox11; KEGG- shm-Shewmr7_3866 cytochrome c oxidase assembly protein CtaG/Cox11 (188 aa)
     
        0.403
Your Current Organism:
Shewanella putrefaciens
NCBI taxonomy Id: 319224
Other names: S. putrefaciens CN-32, Shewanella putrefaciens, Shewanella putrefaciens CN-32, Shewanella putrefaciens str. CN-32, Shewanella putrefaciens strain CN-32
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