STRINGSTRING
ABP74277.1 protein (Shewanella putrefaciens) - STRING interaction network
"ABP74277.1" - PFAM: protein of unknown function DUF107 in Shewanella putrefaciens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABP74277.1PFAM- protein of unknown function DUF107; KEGG- shm-Shewmr7_0449 protein of unknown function DUF107 (156 aa)    
Predicted Functional Partners:
ABP74279.1
PFAM- band 7 protein; KEGG- son-SO4128 SPFH domain/Band 7 family protein (314 aa)
 
   
  0.937
ABP74278.1
PFAM- band 7 protein; KEGG- son-SO4129 SPFH domain/Band 7 family protein (311 aa)
 
   
  0.936
ABP77058.1
KEGG- son-SO0514 hypothetical protein (121 aa)
   
          0.779
ABP75454.1
KEGG- son-SO1913 hypothetical protein (134 aa)
   
          0.767
ABP74052.1
KEGG- shm-Shewmr7_3828 hypothetical protein (235 aa)
   
          0.764
ABP75360.1
KEGG- shm-Shewmr7_1610 hypothetical protein (609 aa)
   
          0.762
ABP75654.1
PFAM- peptidase M3A and M3B, thimet/oligopeptidase F; KEGG- shm-Shewmr7_2087 hypothetical protein (583 aa)
   
          0.750
ABP74373.1
PFAM- HDOD; KEGG- she-Shewmr4_0609 putative signal transduction protein (381 aa)
   
          0.736
ABP74284.1
KEGG- son-SO4121 hypothetical protein (300 aa)
   
          0.734
ABP75483.1
KEGG- she-Shewmr4_2180 hypothetical protein (238 aa)
   
          0.730
Your Current Organism:
Shewanella putrefaciens
NCBI taxonomy Id: 319224
Other names: S. putrefaciens CN-32, Shewanella putrefaciens, Shewanella putrefaciens CN-32, Shewanella putrefaciens str. CN-32, Shewanella putrefaciens strain CN-32
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