STRINGSTRING
ABP74307.1 protein (Shewanella putrefaciens) - STRING interaction network
"ABP74307.1" - Cell shape-determining protein MreC in Shewanella putrefaciens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABP74307.1Cell shape-determining protein MreC; Involved in formation and maintenance of cell shape (334 aa)    
Predicted Functional Partners:
ABP74306.1
TIGRFAM- cell shape determining protein, MreB/Mrl family; PFAM- cell shape determining protein MreB/Mrl; KEGG- son-SO4098 rod shape-determining protein MreB (349 aa)
 
 
  0.994
ABP74308.1
Rod shape-determining protein MreD; Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins (162 aa)
 
 
  0.988
mrdA
Peptidoglycan D,D-transpeptidase MrdA; Catalyzes cross-linking of the peptidoglycan cell wall (618 aa)
 
 
  0.948
ABP74309.1
Maf-like protein Sputcn32_0577; TIGRFAM- maf protein; PFAM- Maf family protein; KEGG- shm-Shewmr7_0482 maf protein (198 aa)
   
   
  0.909
mrdB
Peptidoglycan glycosyltransferase MrdB; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily (368 aa)
 
 
  0.908
ABP76374.1
KEGG- she-Shewmr4_1227 hypothetical protein (361 aa)
 
 
  0.847
ftsI
Peptidoglycan D,D-transpeptidase FtsI; Catalyzes cross-linking of the peptidoglycan cell wall at the division septum; Belongs to the transpeptidase family. FtsI subfamily (583 aa)
 
 
  0.751
leuS
Leucine--tRNA ligase; TIGRFAM- leucyl-tRNA synthetase; KEGG- son-SO1174 leucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family (859 aa)
     
        0.699
pcnB
Poly(A) polymerase I; Adds poly(A) tail to the 3’ end of many RNAs, which usually targets these RNAs for decay. Plays a significant role in the global control of gene expression, through influencing the rate of transcript degradation, and in the general RNA quality control (494 aa)
 
        0.693
ftsA
Cell division protein FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring; Belongs to the FtsA/MreB family (411 aa)
   
   
  0.663
Your Current Organism:
Shewanella putrefaciens
NCBI taxonomy Id: 319224
Other names: S. putrefaciens CN-32, Shewanella putrefaciens, Shewanella putrefaciens CN-32, Shewanella putrefaciens str. CN-32, Shewanella putrefaciens strain CN-32
Server load: low (11%) [HD]