STRINGSTRING
ABP74316.1 protein (Shewanella putrefaciens) - STRING interaction network
"ABP74316.1" - PFAM: ABC-2 type transporter in Shewanella putrefaciens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABP74316.1PFAM- ABC-2 type transporter; KEGG- son-SO4088 conserved hypothetical protein (408 aa)    
Predicted Functional Partners:
ABP74317.1
PFAM- ABC-2 type transporter; KEGG- she-Shewmr4_3461 ABC-2 type transporter (382 aa)
   
0.968
ABP74315.1
PFAM- secretion protein HlyD family protein; KEGG- son-SO4089 HlyD family secretion protein (324 aa)
 
  0.950
ABP74314.1
PFAM- outer membrane efflux protein; KEGG- shm-Shewmr7_0487 outer membrane efflux protein (464 aa)
 
     
  0.938
ABP75146.1
PFAM- ABC transporter related; SMART- AAA ATPase; KEGG- she-Shewmr4_2574 ABC transporter related (317 aa)
 
 
  0.758
ABP75145.1
PFAM- secretion protein HlyD family protein; KEGG- she-Shewmr4_2575 secretion protein HlyD family protein (332 aa)
 
 
  0.755
ABP76854.1
Histidine kinase; KEGG- shm-Shewmr7_3307 multi-sensor hybrid histidine kinase; TIGRFAM- PAS sensor protein; PFAM- response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; Hpt domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART- PAS domain containing protein; PAC repeat-containing protein (1771 aa)
     
 
  0.737
ABP77299.1
KEGG- shm-Shewmr7_3642 putative outer membrane adhesin like protein; TIGRFAM- putative outer membrane adhesin like proteiin; PFAM- Hemolysin-type calcium-binding region; TMP repeat-containing protein; SMART- Cadherin (4220 aa)
         
  0.710
macB
Macrolide export ATP-binding/permease protein MacB; Part of the tripartite efflux system MacAB-TolC. MacB is a non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides (647 aa)
     
 
  0.689
ABP75732.1
DNA translocase FtsK; PFAM- cell divisionFtsK/SpoIIIE; KEGG- shm-Shewmr7_2013 cell divisionFtsK/SpoIIIE (896 aa)
         
  0.681
ABP76069.1
Integral membrane sensor hybrid histidine kinase; PFAM- response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG- son-SO2742 sensor histidine kinase/response regulator (1145 aa)
 
 
 
  0.567
Your Current Organism:
Shewanella putrefaciens
NCBI taxonomy Id: 319224
Other names: S. putrefaciens CN-32, Shewanella putrefaciens, Shewanella putrefaciens CN-32, Shewanella putrefaciens str. CN-32, Shewanella putrefaciens strain CN-32
Server load: low (15%) [HD]