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ABP74317.1 protein (Shewanella putrefaciens) - STRING interaction network
"ABP74317.1" - PFAM: ABC-2 type transporter in Shewanella putrefaciens
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABP74317.1PFAM- ABC-2 type transporter; KEGG- she-Shewmr4_3461 ABC-2 type transporter (382 aa)    
Predicted Functional Partners:
ABP74316.1
PFAM- ABC-2 type transporter; KEGG- son-SO4088 conserved hypothetical protein (408 aa)
   
0.968
ABP74315.1
PFAM- secretion protein HlyD family protein; KEGG- son-SO4089 HlyD family secretion protein (324 aa)
 
  0.958
ABP74314.1
PFAM- outer membrane efflux protein; KEGG- shm-Shewmr7_0487 outer membrane efflux protein (464 aa)
 
     
  0.934
ABP75145.1
PFAM- secretion protein HlyD family protein; KEGG- she-Shewmr4_2575 secretion protein HlyD family protein (332 aa)
 
      0.611
ABP75146.1
PFAM- ABC transporter related; SMART- AAA ATPase; KEGG- she-Shewmr4_2574 ABC transporter related (317 aa)
 
 
  0.597
ABP74318.1
PFAM- Ion transport protein; KEGG- sde-Sde_1761 cold shock protein (295 aa)
              0.448
ABP74313.1
PFAM- peptidase U62, modulator of DNA gyrase; KEGG- son-SO4091 TldD protein (482 aa)
         
  0.429
queF
NADPH-dependent 7-cyano-7-deazaguanine reductase; Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) (296 aa)
   
   
  0.427
Your Current Organism:
Shewanella putrefaciens
NCBI taxonomy Id: 319224
Other names: S. putrefaciens CN-32, Shewanella putrefaciens, Shewanella putrefaciens CN-32, Shewanella putrefaciens str. CN-32, Shewanella putrefaciens strain CN-32
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