STRINGSTRING
ABP74320.1 protein (Shewanella putrefaciens) - STRING interaction network
"ABP74320.1" - KEGG: pfo:Pfl_3517 hypothetical protein in Shewanella putrefaciens
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABP74320.1KEGG- pfo-Pfl_3517 hypothetical protein (356 aa)    
Predicted Functional Partners:
ABP74397.1
KEGG- she-Shewmr4_0638 hypothetical protein (1223 aa)
     
 
  0.759
parE
DNA topoisomerase 4 subunit B; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase family. ParE type 1 subfamily (628 aa)
     
 
  0.706
gyrB
DNA gyrase subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner (805 aa)
     
 
  0.706
ABP77640.1
SMART- AAA ATPase; KEGG- ssn-SSO_3893 ATP-binding protein (546 aa)
   
 
  0.600
ABP74321.1
KEGG- bam-Bamb_5633 hypothetical protein (206 aa)
 
          0.598
ABP76854.1
Histidine kinase; KEGG- shm-Shewmr7_3307 multi-sensor hybrid histidine kinase; TIGRFAM- PAS sensor protein; PFAM- response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; Hpt domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART- PAS domain containing protein; PAC repeat-containing protein (1771 aa)
         
  0.585
ABP73861.1
PFAM- PKD domain containing protein; peptidase M6, immune inhibitor A; KEGG- shm-Shewmr7_0119 peptidase M6, immune inhibitor A (869 aa)
       
 
  0.581
ABP77546.1
KEGG- dar-Daro_2667 hypothetical protein (682 aa)
   
 
  0.554
ABP75257.1
PFAM- SMC domain protein; KEGG- she-Shewmr4_2449 SMC domain protein (1018 aa)
   
 
  0.554
ABP75239.1
PFAM- DNA polymerase B, exonuclease; DNA polymerase B region; SMART- DNA-directed DNA polymerase B; KEGG- shm-Shewmr7_2537 DNA polymerase B region (797 aa)
     
 
  0.549
Your Current Organism:
Shewanella putrefaciens
NCBI taxonomy Id: 319224
Other names: S. putrefaciens CN-32, Shewanella putrefaciens, Shewanella putrefaciens CN-32, Shewanella putrefaciens str. CN-32, Shewanella putrefaciens strain CN-32
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