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ABP74336.1 protein (Shewanella putrefaciens) - STRING interaction network
"ABP74336.1" - PFAM: OmpA domain protein transmembrane region-containing protein in Shewanella putrefaciens
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABP74336.1PFAM- OmpA domain protein transmembrane region-containing protein; KEGG- sfr-Sfri_0734 OmpA domain protein transmembrane region-containing protein (192 aa)    
Predicted Functional Partners:
ABP75049.1
KEGG- shm-Shewmr7_2740 hypothetical protein (64 aa)
   
          0.678
ABP75048.1
PFAM- Dual specificity protein phosphatase; diacylglycerol kinase, catalytic region; KEGG- she-Shewmr4_2673 dual specificity protein phosphatase (560 aa)
   
          0.662
ABP75045.1
PFAM- transport-associated; SMART- Transport-associated and nodulation region, bacteria; KEGG- shm-Shewmr7_2744 transport-associated (181 aa)
   
          0.595
ABP76854.1
Histidine kinase; KEGG- shm-Shewmr7_3307 multi-sensor hybrid histidine kinase; TIGRFAM- PAS sensor protein; PFAM- response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; Hpt domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART- PAS domain containing protein; PAC repeat-containing protein (1771 aa)
   
   
  0.511
rpsI
PFAM- ribosomal protein S9; KEGG- shm-Shewmr7_0679 ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family (130 aa)
     
      0.502
rpmJ
PFAM- ribosomal protein L36; KEGG- shm-Shewmr7_0215 ribosomal protein L36; Belongs to the bacterial ribosomal protein bL36 family (37 aa)
       
 
  0.499
ABP75085.1
PFAM- outer membrane chaperone Skp (OmpH); KEGG- shm-Shewmr7_2699 outer membrane chaperone Skp (OmpH); Belongs to the skp family (165 aa)
   
 
  0.497
secA
Protein translocase subunit SecA; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane; Belongs to the SecA family (909 aa)
       
 
  0.495
rpmF
TIGRFAM- ribosomal protein L32; PFAM- ribosomal L32p protein; KEGG- shm-Shewmr7_2470 ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family (56 aa)
       
 
  0.491
rplD
50S ribosomal protein L4; One of the primary rRNA binding proteins, this protein initially binds near the 5’-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome (201 aa)
       
      0.489
Your Current Organism:
Shewanella putrefaciens
NCBI taxonomy Id: 319224
Other names: S. putrefaciens CN-32, Shewanella putrefaciens, Shewanella putrefaciens CN-32, Shewanella putrefaciens str. CN-32, Shewanella putrefaciens strain CN-32
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