STRINGSTRING
ABP74352.1 protein (Shewanella putrefaciens) - STRING interaction network
"ABP74352.1" - PFAM: secretion protein HlyD family protein in Shewanella putrefaciens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABP74352.1PFAM- secretion protein HlyD family protein; KEGG- shm-Shewmr7_0517 secretion protein HlyD family protein (352 aa)    
Predicted Functional Partners:
ABP74351.1
PFAM- regulatory protein, MarR; KEGG- she-Shewmr4_3435 transcriptional regulator, MarR family (168 aa)
 
 
 
  0.960
ABP74353.1
KEGG- she-Shewmr4_3433 hypothetical protein (342 aa)
 
          0.915
ABP73994.1
TIGRFAM- RND efflux system, outer membrane lipoprotein, NodT family; PFAM- outer membrane efflux protein; KEGG- ecs-ECs0610 putative copper efflux system outer membrane protein CusC (461 aa)
 
 
  0.737
ABP76881.1
TIGRFAM- RND efflux system, outer membrane lipoprotein, NodT family; PFAM- outer membrane efflux protein; KEGG- son-SO0822 outer membrane efflux family protein (471 aa)
 
 
  0.689
ABP74498.1
TIGRFAM- type I secretion outer membrane protein, TolC family; PFAM- outer membrane efflux protein; KEGG- shm-Shewmr7_0753 type I secretion outer membrane protein, TolC family (435 aa)
   
 
  0.595
ABP77302.1
TIGRFAM- type I secretion outer membrane protein, TolC family; PFAM- outer membrane efflux protein; KEGG- shm-Shewmr7_3645 type I secretion outer membrane protein, TolC family (471 aa)
 
 
  0.545
ABP74350.1
PFAM- histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG- son-SO4053 methyl-accepting chemotaxis protein (634 aa)
              0.537
ABP74316.1
PFAM- ABC-2 type transporter; KEGG- son-SO4088 conserved hypothetical protein (408 aa)
 
 
 
  0.506
ABP77700.1
KEGG- tcx-Tcr_2097 outer membrane efflux protein (427 aa)
   
 
  0.475
ABP77055.1
KEGG- shm-Shewmr7_3515 outer membrane efflux protein (492 aa)
   
 
  0.475
Your Current Organism:
Shewanella putrefaciens
NCBI taxonomy Id: 319224
Other names: S. putrefaciens CN-32, Shewanella putrefaciens, Shewanella putrefaciens CN-32, Shewanella putrefaciens str. CN-32, Shewanella putrefaciens strain CN-32
Server load: low (10%) [HD]