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ABP74382.1 protein (Shewanella putrefaciens) - STRING interaction network
"ABP74382.1" - Transcriptional regulator, Crp/Fnr family in Shewanella putrefaciens
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
ABP74382.1Transcriptional regulator, Crp/Fnr family; PFAM- cyclic nucleotide-binding; regulatory protein, Crp; KEGG- shm-Shewmr7_3412 transcriptional regulator, Crp/Fnr family (211 aa)    
Predicted Functional Partners:
rpoD
RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth (616 aa)
       
 
  0.931
rpoA
DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (329 aa)
     
      0.918
rpoC
DNA-directed RNA polymerase subunit beta’; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1405 aa)
       
 
  0.918
rpoZ
DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta’ subunit thereby facilitating its interaction with the beta and alpha subunits (92 aa)
       
      0.918
rpoB
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1343 aa)
       
      0.914
ABP77294.1
PFAM- adenylate cyclase, class-I; KEGG- she-Shewmr4_0389 adenylate cyclase; Belongs to the adenylyl cyclase class-1 family (804 aa)
   
 
 
  0.766
cpdA
3’,5’-cyclic adenosine monophosphate phosphodiesterase CpdA; Hydrolyzes cAMP to 5’-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes (279 aa)
 
   
  0.750
rpoS
TIGRFAM- RNA polymerase sigma factor RpoS; PFAM- sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; sigma-70 region 1.2; KEGG- son-SO3432 RNA polymerase sigma-38 factor (326 aa)
     
 
  0.716
ABP76854.1
Histidine kinase; KEGG- shm-Shewmr7_3307 multi-sensor hybrid histidine kinase; TIGRFAM- PAS sensor protein; PFAM- response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; Hpt domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART- PAS domain containing protein; PAC repeat-containing protein (1771 aa)
   
 
  0.658
ABP74379.1
Histidine kinase; PFAM- ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG- shm-Shewmr7_3415 periplasmic sensor signal transduction histidine kinase (442 aa)
   
 
  0.647
Your Current Organism:
Shewanella putrefaciens
NCBI taxonomy Id: 319224
Other names: S. putrefaciens CN-32, Shewanella putrefaciens, Shewanella putrefaciens CN-32, Shewanella putrefaciens str. CN-32, Shewanella putrefaciens strain CN-32
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