STRINGSTRING
ABP74386.1 protein (Shewanella putrefaciens) - STRING interaction network
"ABP74386.1" - Penicillin-binding protein 1B in Shewanella putrefaciens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABP74386.1Penicillin-binding protein 1B; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross-linking of the peptide subunits) (779 aa)    
Predicted Functional Partners:
ABP76592.1
Serine-type D-Ala-D-Ala carboxypeptidase; PFAM- peptidase S11, D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein; KEGG- son-SO1164 D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family (391 aa)
       
  0.949
murG
Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily (362 aa)
 
 
  0.939
ABP77420.1
TIGRFAM- penicillin-binding protein, 1A family; PFAM- glycosyl transferase, family 51; penicillin-binding protein, transpeptidase; KEGG- shm-Shewmr7_0241 penicillin-binding protein, 1A family (839 aa)
 
 
0.926
ABP75755.1
KEGG- shm-Shewmr7_2044 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase; TIGRFAM- D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase; PFAM- peptidase S13, D-Ala-D-Ala carboxypeptidase C (504 aa)
     
 
  0.920
mrdA
Peptidoglycan D,D-transpeptidase MrdA; Catalyzes cross-linking of the peptidoglycan cell wall (618 aa)
 
 
  0.843
ftsI
Peptidoglycan D,D-transpeptidase FtsI; Catalyzes cross-linking of the peptidoglycan cell wall at the division septum; Belongs to the transpeptidase family. FtsI subfamily (583 aa)
 
 
  0.819
ABP74385.1
KEGG- shm-Shewmr7_3407 ATP-dependent helicase HrpB; TIGRFAM- ATP-dependent helicase HrpB; PFAM- helicase domain protein; helicase-associated domain protein; DEAD/DEAH box helicase domain protein; Helicase ATP-dependent, C-terminal domain protein; SMART- DEAD-like helicases-like (846 aa)
   
        0.789
ftsW
Probable peptidoglycan glycosyltransferase FtsW; Peptidoglycan polymerase that is essential for cell division; Belongs to the SEDS family. FtsW subfamily (403 aa)
 
 
  0.717
mrdB
Peptidoglycan glycosyltransferase MrdB; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily (368 aa)
 
 
  0.712
ABP76995.1
N-acetylmuramoyl-L-alanine amidase; PFAM- Peptidoglycan-binding LysM; cell wall hydrolase/autolysin; KEGG- she-Shewmr4_0595 N-acetylmuramoyl-L-alanine amidase (476 aa)
   
 
  0.623
Your Current Organism:
Shewanella putrefaciens
NCBI taxonomy Id: 319224
Other names: S. putrefaciens CN-32, Shewanella putrefaciens, Shewanella putrefaciens CN-32, Shewanella putrefaciens str. CN-32, Shewanella putrefaciens strain CN-32
Server load: low (12%) [HD]